Tau-typing: a Nextflow pipeline for finding the best phylogenetic markers in the genome for molecular typing of microbial species

SUMMARY: Tau-typing is an integrated analysis pipeline for identifying genes or genomic segments whose phylogenetic resolving power most closely resembles the genome-wide resolving power of an input collection of genomes using the Kendall Tau rank correlation statistic. The pipeline is implemented i...

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Detalles Bibliográficos
Autores principales: Seabolt, Matthew H, Boddapati, Arun K, Forstedt, Joshua J, Konstantinidis, Konstantinos T
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10336021/
https://www.ncbi.nlm.nih.gov/pubmed/37417952
http://dx.doi.org/10.1093/bioinformatics/btad425

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10336021/
https://www.ncbi.nlm.nih.gov/pubmed/37417952
http://dx.doi.org/10.1093/bioinformatics/btad425

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