Cargando…

Genome-Wide Investigation of BAM Gene Family in Annona atemoya: Evolution and Expression Network Profiles during Fruit Ripening

β-amylase proteins (BAM) are important to many aspects of physiological process such as starch degradation. However, little information was available about the BAM genes in Annona atemoya, an important tropical fruit. Seven BAM genes containing the conservative domain of glycoside hydrolase family 1...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Luli, Jing, Minmin, Gu, Shuailei, Li, Dongliang, Dai, Xiaohong, Chen, Zhihui, Chen, Jingjing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10341951/
https://www.ncbi.nlm.nih.gov/pubmed/37445694
http://dx.doi.org/10.3390/ijms241310516
_version_ 1785072384144834560
author Wang, Luli
Jing, Minmin
Gu, Shuailei
Li, Dongliang
Dai, Xiaohong
Chen, Zhihui
Chen, Jingjing
author_facet Wang, Luli
Jing, Minmin
Gu, Shuailei
Li, Dongliang
Dai, Xiaohong
Chen, Zhihui
Chen, Jingjing
author_sort Wang, Luli
collection PubMed
description β-amylase proteins (BAM) are important to many aspects of physiological process such as starch degradation. However, little information was available about the BAM genes in Annona atemoya, an important tropical fruit. Seven BAM genes containing the conservative domain of glycoside hydrolase family 14 (PF01373) were identified with Annona atemoya genome, and these BAM genes can be divided into four groups. Subcellular localization analysis revealed that AaBAM3 and AaBAM9 were located in the chloroplast, and AaBAM1.2 was located in the cell membrane and the chloroplast. The AaBAMs belonging to Subfamily I contribute to starch degradation have the higher expression than those belonging to Subfamily II. The analysis of the expression showed that AaBAM3 may function in the whole fruit ripening process, and AaBAM1.2 may be important to starch degradation in other organs. Temperature and ethylene affect the expression of major AaBAM genes in Subfamily I during fruit ripening. These expressions and subcellular localization results indicating β-amylase play an important role in starch degradation.
format Online
Article
Text
id pubmed-10341951
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-103419512023-07-14 Genome-Wide Investigation of BAM Gene Family in Annona atemoya: Evolution and Expression Network Profiles during Fruit Ripening Wang, Luli Jing, Minmin Gu, Shuailei Li, Dongliang Dai, Xiaohong Chen, Zhihui Chen, Jingjing Int J Mol Sci Article β-amylase proteins (BAM) are important to many aspects of physiological process such as starch degradation. However, little information was available about the BAM genes in Annona atemoya, an important tropical fruit. Seven BAM genes containing the conservative domain of glycoside hydrolase family 14 (PF01373) were identified with Annona atemoya genome, and these BAM genes can be divided into four groups. Subcellular localization analysis revealed that AaBAM3 and AaBAM9 were located in the chloroplast, and AaBAM1.2 was located in the cell membrane and the chloroplast. The AaBAMs belonging to Subfamily I contribute to starch degradation have the higher expression than those belonging to Subfamily II. The analysis of the expression showed that AaBAM3 may function in the whole fruit ripening process, and AaBAM1.2 may be important to starch degradation in other organs. Temperature and ethylene affect the expression of major AaBAM genes in Subfamily I during fruit ripening. These expressions and subcellular localization results indicating β-amylase play an important role in starch degradation. MDPI 2023-06-22 /pmc/articles/PMC10341951/ /pubmed/37445694 http://dx.doi.org/10.3390/ijms241310516 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wang, Luli
Jing, Minmin
Gu, Shuailei
Li, Dongliang
Dai, Xiaohong
Chen, Zhihui
Chen, Jingjing
Genome-Wide Investigation of BAM Gene Family in Annona atemoya: Evolution and Expression Network Profiles during Fruit Ripening
title Genome-Wide Investigation of BAM Gene Family in Annona atemoya: Evolution and Expression Network Profiles during Fruit Ripening
title_full Genome-Wide Investigation of BAM Gene Family in Annona atemoya: Evolution and Expression Network Profiles during Fruit Ripening
title_fullStr Genome-Wide Investigation of BAM Gene Family in Annona atemoya: Evolution and Expression Network Profiles during Fruit Ripening
title_full_unstemmed Genome-Wide Investigation of BAM Gene Family in Annona atemoya: Evolution and Expression Network Profiles during Fruit Ripening
title_short Genome-Wide Investigation of BAM Gene Family in Annona atemoya: Evolution and Expression Network Profiles during Fruit Ripening
title_sort genome-wide investigation of bam gene family in annona atemoya: evolution and expression network profiles during fruit ripening
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10341951/
https://www.ncbi.nlm.nih.gov/pubmed/37445694
http://dx.doi.org/10.3390/ijms241310516
work_keys_str_mv AT wangluli genomewideinvestigationofbamgenefamilyinannonaatemoyaevolutionandexpressionnetworkprofilesduringfruitripening
AT jingminmin genomewideinvestigationofbamgenefamilyinannonaatemoyaevolutionandexpressionnetworkprofilesduringfruitripening
AT gushuailei genomewideinvestigationofbamgenefamilyinannonaatemoyaevolutionandexpressionnetworkprofilesduringfruitripening
AT lidongliang genomewideinvestigationofbamgenefamilyinannonaatemoyaevolutionandexpressionnetworkprofilesduringfruitripening
AT daixiaohong genomewideinvestigationofbamgenefamilyinannonaatemoyaevolutionandexpressionnetworkprofilesduringfruitripening
AT chenzhihui genomewideinvestigationofbamgenefamilyinannonaatemoyaevolutionandexpressionnetworkprofilesduringfruitripening
AT chenjingjing genomewideinvestigationofbamgenefamilyinannonaatemoyaevolutionandexpressionnetworkprofilesduringfruitripening