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Association of C>U RNA Editing with Human Disease Variants
RNA-editing is an important post-transcriptional RNA sequence modification performed by two catalytic enzymes, “ADAR”(A>I) and “APOBEC”(C>U). Although APOBEC-mediated C>U editing has been associated with a number of human cancers, the extent of C>U editing in human disease remains unclea...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10354784/ https://www.ncbi.nlm.nih.gov/pubmed/32570581 http://dx.doi.org/10.3233/SHTI200364 |
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author | MANDLOI, Sapan FALLS, Zackary DENG, Rong SAMUDRALA, Ram ELKIN, Peter L. |
author_facet | MANDLOI, Sapan FALLS, Zackary DENG, Rong SAMUDRALA, Ram ELKIN, Peter L. |
author_sort | MANDLOI, Sapan |
collection | PubMed |
description | RNA-editing is an important post-transcriptional RNA sequence modification performed by two catalytic enzymes, “ADAR”(A>I) and “APOBEC”(C>U). Although APOBEC-mediated C>U editing has been associated with a number of human cancers, the extent of C>U editing in human disease remains unclear. Here, we performed an association study and found that at least 1293 human disease variants occur at sites predicted by sequence motif analysis (RNASee protocol) to undergo APOBEC3A/G C>U editing. These variants were associated with a wide array of human disease conditions ranging from cancer, metabolic disorders, retinopathies, cardiomyopathies, neurodegenerative disorders and immunodeficiencies. These results indicate that APOBEC mediated C>U RNA editing may have widespread and previously unreported contributions to human disease conditions.. |
format | Online Article Text |
id | pubmed-10354784 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
record_format | MEDLINE/PubMed |
spelling | pubmed-103547842023-07-19 Association of C>U RNA Editing with Human Disease Variants MANDLOI, Sapan FALLS, Zackary DENG, Rong SAMUDRALA, Ram ELKIN, Peter L. Stud Health Technol Inform Article RNA-editing is an important post-transcriptional RNA sequence modification performed by two catalytic enzymes, “ADAR”(A>I) and “APOBEC”(C>U). Although APOBEC-mediated C>U editing has been associated with a number of human cancers, the extent of C>U editing in human disease remains unclear. Here, we performed an association study and found that at least 1293 human disease variants occur at sites predicted by sequence motif analysis (RNASee protocol) to undergo APOBEC3A/G C>U editing. These variants were associated with a wide array of human disease conditions ranging from cancer, metabolic disorders, retinopathies, cardiomyopathies, neurodegenerative disorders and immunodeficiencies. These results indicate that APOBEC mediated C>U RNA editing may have widespread and previously unreported contributions to human disease conditions.. 2020-06-16 /pmc/articles/PMC10354784/ /pubmed/32570581 http://dx.doi.org/10.3233/SHTI200364 Text en https://creativecommons.org/licenses/by-nc/4.0/This article is published online with Open Access by IOS Press and distributed under the terms of the Creative Commons Attribution Non-Commercial License 4.0 (CC BY-NC 4.0). |
spellingShingle | Article MANDLOI, Sapan FALLS, Zackary DENG, Rong SAMUDRALA, Ram ELKIN, Peter L. Association of C>U RNA Editing with Human Disease Variants |
title | Association of C>U RNA Editing with Human Disease Variants |
title_full | Association of C>U RNA Editing with Human Disease Variants |
title_fullStr | Association of C>U RNA Editing with Human Disease Variants |
title_full_unstemmed | Association of C>U RNA Editing with Human Disease Variants |
title_short | Association of C>U RNA Editing with Human Disease Variants |
title_sort | association of c>u rna editing with human disease variants |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10354784/ https://www.ncbi.nlm.nih.gov/pubmed/32570581 http://dx.doi.org/10.3233/SHTI200364 |
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