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Association of C>U RNA Editing with Human Disease Variants

RNA-editing is an important post-transcriptional RNA sequence modification performed by two catalytic enzymes, “ADAR”(A>I) and “APOBEC”(C>U). Although APOBEC-mediated C>U editing has been associated with a number of human cancers, the extent of C>U editing in human disease remains unclea...

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Detalles Bibliográficos
Autores principales: MANDLOI, Sapan, FALLS, Zackary, DENG, Rong, SAMUDRALA, Ram, ELKIN, Peter L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10354784/
https://www.ncbi.nlm.nih.gov/pubmed/32570581
http://dx.doi.org/10.3233/SHTI200364
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author MANDLOI, Sapan
FALLS, Zackary
DENG, Rong
SAMUDRALA, Ram
ELKIN, Peter L.
author_facet MANDLOI, Sapan
FALLS, Zackary
DENG, Rong
SAMUDRALA, Ram
ELKIN, Peter L.
author_sort MANDLOI, Sapan
collection PubMed
description RNA-editing is an important post-transcriptional RNA sequence modification performed by two catalytic enzymes, “ADAR”(A>I) and “APOBEC”(C>U). Although APOBEC-mediated C>U editing has been associated with a number of human cancers, the extent of C>U editing in human disease remains unclear. Here, we performed an association study and found that at least 1293 human disease variants occur at sites predicted by sequence motif analysis (RNASee protocol) to undergo APOBEC3A/G C>U editing. These variants were associated with a wide array of human disease conditions ranging from cancer, metabolic disorders, retinopathies, cardiomyopathies, neurodegenerative disorders and immunodeficiencies. These results indicate that APOBEC mediated C>U RNA editing may have widespread and previously unreported contributions to human disease conditions..
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spelling pubmed-103547842023-07-19 Association of C>U RNA Editing with Human Disease Variants MANDLOI, Sapan FALLS, Zackary DENG, Rong SAMUDRALA, Ram ELKIN, Peter L. Stud Health Technol Inform Article RNA-editing is an important post-transcriptional RNA sequence modification performed by two catalytic enzymes, “ADAR”(A>I) and “APOBEC”(C>U). Although APOBEC-mediated C>U editing has been associated with a number of human cancers, the extent of C>U editing in human disease remains unclear. Here, we performed an association study and found that at least 1293 human disease variants occur at sites predicted by sequence motif analysis (RNASee protocol) to undergo APOBEC3A/G C>U editing. These variants were associated with a wide array of human disease conditions ranging from cancer, metabolic disorders, retinopathies, cardiomyopathies, neurodegenerative disorders and immunodeficiencies. These results indicate that APOBEC mediated C>U RNA editing may have widespread and previously unreported contributions to human disease conditions.. 2020-06-16 /pmc/articles/PMC10354784/ /pubmed/32570581 http://dx.doi.org/10.3233/SHTI200364 Text en https://creativecommons.org/licenses/by-nc/4.0/This article is published online with Open Access by IOS Press and distributed under the terms of the Creative Commons Attribution Non-Commercial License 4.0 (CC BY-NC 4.0).
spellingShingle Article
MANDLOI, Sapan
FALLS, Zackary
DENG, Rong
SAMUDRALA, Ram
ELKIN, Peter L.
Association of C>U RNA Editing with Human Disease Variants
title Association of C>U RNA Editing with Human Disease Variants
title_full Association of C>U RNA Editing with Human Disease Variants
title_fullStr Association of C>U RNA Editing with Human Disease Variants
title_full_unstemmed Association of C>U RNA Editing with Human Disease Variants
title_short Association of C>U RNA Editing with Human Disease Variants
title_sort association of c>u rna editing with human disease variants
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10354784/
https://www.ncbi.nlm.nih.gov/pubmed/32570581
http://dx.doi.org/10.3233/SHTI200364
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