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Generation of gene-of-interest double allele knockout clones in primary human T cells by CRISPR
Gene-of-interest (GOI) knockout is an important technique to study the genetic mechanisms of T cells. Here, we present a protocol to generate GOI double allele gene knockouts in primary human T cells by CRISPR, thus depleting proteins of interest expressed intracellularly or extracellularly in prima...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10362176/ https://www.ncbi.nlm.nih.gov/pubmed/37432856 http://dx.doi.org/10.1016/j.xpro.2023.102445 |
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author | Wu, Ling Tan, Jia Chi Gascoigne, Nicholas R.J. |
author_facet | Wu, Ling Tan, Jia Chi Gascoigne, Nicholas R.J. |
author_sort | Wu, Ling |
collection | PubMed |
description | Gene-of-interest (GOI) knockout is an important technique to study the genetic mechanisms of T cells. Here, we present a protocol to generate GOI double allele gene knockouts in primary human T cells by CRISPR, thus depleting proteins of interest expressed intracellularly or extracellularly in primary T cells. We describe steps for gRNA selection and efficiency validation, homology-directed repair (HDR) DNA template design and cloning, and genome editing and HDR gene insertion. We then detail clone isolation and GOI knockout validation. For complete details on the use and execution of this protocol, please refer to Wu et al.(1) |
format | Online Article Text |
id | pubmed-10362176 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-103621762023-07-23 Generation of gene-of-interest double allele knockout clones in primary human T cells by CRISPR Wu, Ling Tan, Jia Chi Gascoigne, Nicholas R.J. STAR Protoc Protocol Gene-of-interest (GOI) knockout is an important technique to study the genetic mechanisms of T cells. Here, we present a protocol to generate GOI double allele gene knockouts in primary human T cells by CRISPR, thus depleting proteins of interest expressed intracellularly or extracellularly in primary T cells. We describe steps for gRNA selection and efficiency validation, homology-directed repair (HDR) DNA template design and cloning, and genome editing and HDR gene insertion. We then detail clone isolation and GOI knockout validation. For complete details on the use and execution of this protocol, please refer to Wu et al.(1) Elsevier 2023-07-09 /pmc/articles/PMC10362176/ /pubmed/37432856 http://dx.doi.org/10.1016/j.xpro.2023.102445 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Protocol Wu, Ling Tan, Jia Chi Gascoigne, Nicholas R.J. Generation of gene-of-interest double allele knockout clones in primary human T cells by CRISPR |
title | Generation of gene-of-interest double allele knockout clones in primary human T cells by CRISPR |
title_full | Generation of gene-of-interest double allele knockout clones in primary human T cells by CRISPR |
title_fullStr | Generation of gene-of-interest double allele knockout clones in primary human T cells by CRISPR |
title_full_unstemmed | Generation of gene-of-interest double allele knockout clones in primary human T cells by CRISPR |
title_short | Generation of gene-of-interest double allele knockout clones in primary human T cells by CRISPR |
title_sort | generation of gene-of-interest double allele knockout clones in primary human t cells by crispr |
topic | Protocol |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10362176/ https://www.ncbi.nlm.nih.gov/pubmed/37432856 http://dx.doi.org/10.1016/j.xpro.2023.102445 |
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