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Reaction Coordinates for Conformational Transitions Using Linear Discriminant Analysis on Positions

[Image: see text] In this work, we demonstrate that Linear Discriminant Analysis (LDA) applied to atomic positions in two different states of a biomolecule produces a good reaction coordinate between those two states. Atomic coordinates of a macromolecule are a direct representation of a macromolecu...

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Detalles Bibliográficos
Autores principales: Sasmal, Subarna, McCullagh, Martin, Hocky, Glen M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10373481/
https://www.ncbi.nlm.nih.gov/pubmed/37130367
http://dx.doi.org/10.1021/acs.jctc.3c00051