Cargando…

Loops and the activity of loop extrusion factors constrain chromatin dynamics

The chromosomes—DNA polymers and their binding proteins—are compacted into a spatially organized, yet dynamic, three-dimensional structure. Recent genome-wide chromatin conformation capture experiments reveal a hierarchical organization of the DNA structure that is imposed, at least in part, by loop...

Descripción completa

Detalles Bibliográficos
Autores principales:	Bailey, Mary Lou P., Surovtsev, Ivan, Williams, Jessica F., Yan, Hao, Yuan, Tianyu, Li, Kevin, Duseau, Katherine, Mochrie, Simon G. J., King, Megan C.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	The American Society for Cell Biology 2023
Materias:	Articles
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10398873/ https://www.ncbi.nlm.nih.gov/pubmed/37126401 http://dx.doi.org/10.1091/mbc.E23-04-0119

Ejemplares similares

Chromatin Loop Extrusion and Chromatin Unknotting
por: Racko, Dusan, et al.
Publicado: (2018)

Chromatin organization by an interplay of loop extrusion and compartmental segregation
por: Nuebler, Johannes, et al.
Publicado: (2018)

Theory of chromatin organization maintained by active loop extrusion
por: Chan, Brian, et al.
Publicado: (2023)

Fundamental Roles of Chromatin Loop Extrusion in Antibody Class Switching
por: Zhang, Xuefei, et al.
Publicado: (2019)

The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination
por: Zhang, Yu, et al.
Publicado: (2019)

Transcription shapes 3D chromatin organization by interacting with loop extrusion
por: Banigan, Edward J., et al.
Publicado: (2023)

Polymer simulations guide the detection and quantification of chromatin loop extrusion by imaging
por: Sabaté, Thomas, et al.
Publicado: (2023)

Local chromatin fiber folding represses transcription and loop extrusion in quiescent cells
por: Swygert, Sarah G, et al.
Publicado: (2021)

Diverse silent chromatin states modulate genome compartmentalization and loop extrusion barriers
por: Spracklin, George, et al.
Publicado: (2022)

Chromosome Compaction by Active Loop Extrusion
por: Goloborodko, Anton, et al.
Publicado: (2016)

3DPolyS-LE: an accessible simulation framework to model the interplay between chromatin and loop extrusion
por: Gitchev, Todor, et al.
Publicado: (2022)

Cohesin mediated loop extrusion from active enhancers form chromatin jets in C. elegans
por: Kim, Jun, et al.
Publicado: (2023)

Dynamic Chromatin Loops and the Regulation of Gene Expression
por: Kimura, Hiroshi, et al.
Publicado: (2007)

Competition between transcription and loop extrusion modulates promoter and enhancer dynamics
por: Platania, Angeliki, et al.
Publicado: (2023)

Competition between transcription and loop extrusion modulates promoter and enhancer dynamics
por: Sexton, Tom, et al.
Publicado: (2023)

InferLoop: leveraging single-cell chromatin accessibility for the signal of chromatin loop
por: Zhang, Feng, et al.
Publicado: (2023)

Emerging Evidence of Chromosome Folding by Loop Extrusion
por: Fudenberg, Geoffrey, et al.
Publicado: (2018)

Cohesin biology meets the loop extrusion model
por: Barrington, Christopher, et al.
Publicado: (2017)

SMC complexes: Lifting the lid on loop extrusion
por: Higashi, Torahiko L., et al.
Publicado: (2022)

Function and Evolution of the Loop Extrusion Machinery in Animals
por: Kabirova, Evelyn, et al.
Publicado: (2023)

Transcription-induced supercoiling as the driving force of chromatin loop extrusion during formation of TADs in interphase chromosomes
por: Racko, Dusan, et al.
Publicado: (2018)

Sensitivity of cohesin–chromatin association to high-salt treatment corroborates non-topological mode of loop extrusion
por: Golov, Arkadiy K., et al.
Publicado: (2021)

Integrating extrusion complex-associated pattern to predict cell type-specific long-range chromatin loops
por: Deng, Yajing, et al.
Publicado: (2022)

Recent evidence that TADs and chromatin loops are dynamic structures
por: Hansen, Anders S., et al.
Publicado: (2017)

Loop-extrusion and polymer phase-separation can co-exist at the single-molecule level to shape chromatin folding
por: Conte, Mattia, et al.
Publicado: (2022)

RNA polymerases as moving barriers to condensin loop extrusion
por: Brandão, Hugo B., et al.
Publicado: (2019)

The interplay between asymmetric and symmetric DNA loop extrusion
por: Banigan, Edward J, et al.
Publicado: (2020)

Theory and simulations of condensin mediated loop extrusion in DNA
por: Takaki, Ryota, et al.
Publicado: (2021)

Loop extrusion promotes an alternate pathway for isotype switching
por: Shen, Hong Ming, et al.
Publicado: (2021)

Loop Extrusion Mediates Physiological IgH Locus Contraction For RAG Scanning
por: Dai, Hai-Qiang, et al.
Publicado: (2021)

CTCF and cohesin regulate chromatin loop stability with distinct dynamics
por: Hansen, Anders S, et al.
Publicado: (2017)

Constrained dynamical systems: separation of constraints into first and second classes
por: Chitaia, N P, et al.
Publicado: (1996)

Loop extrusion as a mechanism for DNA damage repair foci formation
por: Arnould, Coline, et al.
Publicado: (2021)

Extrusion without a motor: a new take on the loop extrusion model of genome organization
por: Brackley, C. A., et al.
Publicado: (2018)

Compaction and segregation of sister chromatids via active loop extrusion
por: Goloborodko, Anton, et al.
Publicado: (2016)

Chromosome organization by one-sided and two-sided loop extrusion
por: Banigan, Edward J, et al.
Publicado: (2020)

Loop competition and extrusion model predicts CTCF interaction specificity
por: Xi, Wang, et al.
Publicado: (2021)

MCM complexes are barriers that restrict cohesin-mediated loop extrusion
por: Dequeker, Bart J. H., et al.
Publicado: (2022)

CRISPR-Mediated Reorganization of Chromatin Loop Structure
por: Morgan, Stefanie L., et al.
Publicado: (2018)

Closed chromatin loops at the ends of chromosomes
por: Nikitina, Tatiana, et al.
Publicado: (2004)

Cannot write session to /tmp/vufind_sessions/sess_8pcahevus9igmcvkkueh09ssb6