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The minimal intrinsic stochasticity of constitutively expressed eukaryotic genes is sub-Poissonian
Gene expression inherently gives rise to stochastic variation (“noise”) in the production of gene products. Minimizing noise is crucial for ensuring reliable cellular functions. However, noise cannot be suppressed below a certain intrinsic limit. For constitutively expressed genes, this limit is typ...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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American Association for the Advancement of Science
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10411910/ https://www.ncbi.nlm.nih.gov/pubmed/37556551 http://dx.doi.org/10.1126/sciadv.adh5138 |
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author | Weidemann, Douglas E. Holehouse, James Singh, Abhyudai Grima, Ramon Hauf, Silke |
author_facet | Weidemann, Douglas E. Holehouse, James Singh, Abhyudai Grima, Ramon Hauf, Silke |
author_sort | Weidemann, Douglas E. |
collection | PubMed |
description | Gene expression inherently gives rise to stochastic variation (“noise”) in the production of gene products. Minimizing noise is crucial for ensuring reliable cellular functions. However, noise cannot be suppressed below a certain intrinsic limit. For constitutively expressed genes, this limit is typically assumed to be Poissonian noise, wherein the variance in mRNA numbers is equal to their mean. Here, we demonstrate that several cell division genes in fission yeast exhibit mRNA variances significantly below this limit. The reduced variance can be explained by a gene expression model incorporating multiple transcription and mRNA degradation steps. Notably, in this sub-Poissonian regime, distinct from Poissonian or super-Poissonian regimes, cytoplasmic noise is effectively suppressed through a higher mRNA export rate. Our findings redefine the lower limit of eukaryotic gene expression noise and uncover molecular requirements for achieving ultralow noise, which is expected to be important for vital cellular functions. |
format | Online Article Text |
id | pubmed-10411910 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Association for the Advancement of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-104119102023-08-10 The minimal intrinsic stochasticity of constitutively expressed eukaryotic genes is sub-Poissonian Weidemann, Douglas E. Holehouse, James Singh, Abhyudai Grima, Ramon Hauf, Silke Sci Adv Biomedicine and Life Sciences Gene expression inherently gives rise to stochastic variation (“noise”) in the production of gene products. Minimizing noise is crucial for ensuring reliable cellular functions. However, noise cannot be suppressed below a certain intrinsic limit. For constitutively expressed genes, this limit is typically assumed to be Poissonian noise, wherein the variance in mRNA numbers is equal to their mean. Here, we demonstrate that several cell division genes in fission yeast exhibit mRNA variances significantly below this limit. The reduced variance can be explained by a gene expression model incorporating multiple transcription and mRNA degradation steps. Notably, in this sub-Poissonian regime, distinct from Poissonian or super-Poissonian regimes, cytoplasmic noise is effectively suppressed through a higher mRNA export rate. Our findings redefine the lower limit of eukaryotic gene expression noise and uncover molecular requirements for achieving ultralow noise, which is expected to be important for vital cellular functions. American Association for the Advancement of Science 2023-08-09 /pmc/articles/PMC10411910/ /pubmed/37556551 http://dx.doi.org/10.1126/sciadv.adh5138 Text en Copyright © 2023 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY). https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution license (https://creativecommons.org/licenses/by/4.0/) , which permits which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Biomedicine and Life Sciences Weidemann, Douglas E. Holehouse, James Singh, Abhyudai Grima, Ramon Hauf, Silke The minimal intrinsic stochasticity of constitutively expressed eukaryotic genes is sub-Poissonian |
title | The minimal intrinsic stochasticity of constitutively expressed eukaryotic genes is sub-Poissonian |
title_full | The minimal intrinsic stochasticity of constitutively expressed eukaryotic genes is sub-Poissonian |
title_fullStr | The minimal intrinsic stochasticity of constitutively expressed eukaryotic genes is sub-Poissonian |
title_full_unstemmed | The minimal intrinsic stochasticity of constitutively expressed eukaryotic genes is sub-Poissonian |
title_short | The minimal intrinsic stochasticity of constitutively expressed eukaryotic genes is sub-Poissonian |
title_sort | minimal intrinsic stochasticity of constitutively expressed eukaryotic genes is sub-poissonian |
topic | Biomedicine and Life Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10411910/ https://www.ncbi.nlm.nih.gov/pubmed/37556551 http://dx.doi.org/10.1126/sciadv.adh5138 |
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