Chaining for accurate alignment of erroneous long reads to acyclic variation graphs

MOTIVATION: Aligning reads to a variation graph is a standard task in pangenomics, with downstream applications such as improving variant calling. While the vg toolkit [Garrison et al. (Variation graph toolkit improves read mapping by representing genetic variation in the reference. Nat Biotechnol 2...

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Detalles Bibliográficos
Autores principales: Ma, Jun, Cáceres, Manuel, Salmela, Leena, Mäkinen, Veli, Tomescu, Alexandru I
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Original Paper
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10423031/
https://www.ncbi.nlm.nih.gov/pubmed/37494467
http://dx.doi.org/10.1093/bioinformatics/btad460

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10423031/
https://www.ncbi.nlm.nih.gov/pubmed/37494467
http://dx.doi.org/10.1093/bioinformatics/btad460

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