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Metagenomic classification with KrakenUniq on low-memory computers
Kraken and KrakenUniq are widely-used tools for classifying metagenomics sequences. A key requirement for these systems is a database containing all k-mers from all genomes that the users want to be able to detect, where k = 31 by default. This database can be very large, easily exceeding 100 gigaby...
| Autores principales: | , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
2022
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10438097/ https://www.ncbi.nlm.nih.gov/pubmed/37602140 http://dx.doi.org/10.21105/joss.04908 |