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Seedability: optimizing alignment parameters for sensitive sequence comparison
MOTIVATION: Most sequence alignment techniques make use of exact k-mer hits, called seeds, as anchors to optimize alignment speed. A large number of bioinformatics tools employing seed-based alignment techniques, such as [Formula: see text] , use a single value of k per sequencing technology, withou...
| Autores principales: | , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Oxford University Press
2023
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10444664/ https://www.ncbi.nlm.nih.gov/pubmed/37621456 http://dx.doi.org/10.1093/bioadv/vbad108 |