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Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13

Hydroxysteroid 17-beta-dehydrogenase 13 (HSD17B13) is a hepatic lipid droplet-associated enzyme that is upregulated in patients with non-alcoholic fatty liver disease. Recently, there have been several reports that predicted loss of function variants in HSD17B13 protect against the progression of st...

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Autores principales: Liu, Shenping, Sommese, Ruth F., Nedoma, Nicole L., Stevens, Lucy Mae, Dutra, Jason K., Zhang, Liying, Edmonds, David J., Wang, Yang, Garnsey, Michelle, Clasquin, Michelle F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10449848/
https://www.ncbi.nlm.nih.gov/pubmed/37620305
http://dx.doi.org/10.1038/s41467-023-40766-0
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author Liu, Shenping
Sommese, Ruth F.
Nedoma, Nicole L.
Stevens, Lucy Mae
Dutra, Jason K.
Zhang, Liying
Edmonds, David J.
Wang, Yang
Garnsey, Michelle
Clasquin, Michelle F.
author_facet Liu, Shenping
Sommese, Ruth F.
Nedoma, Nicole L.
Stevens, Lucy Mae
Dutra, Jason K.
Zhang, Liying
Edmonds, David J.
Wang, Yang
Garnsey, Michelle
Clasquin, Michelle F.
author_sort Liu, Shenping
collection PubMed
description Hydroxysteroid 17-beta-dehydrogenase 13 (HSD17B13) is a hepatic lipid droplet-associated enzyme that is upregulated in patients with non-alcoholic fatty liver disease. Recently, there have been several reports that predicted loss of function variants in HSD17B13 protect against the progression of steatosis to non-alcoholic steatohepatitis with fibrosis and hepatocellular carcinoma. Here we report crystal structures of full length HSD17B13 in complex with its NAD(+) cofactor, and with lipid/detergent molecules and small molecule inhibitors from two distinct series in the ligand binding pocket. These structures provide insights into a mechanism for lipid droplet-associated proteins anchoring to membranes as well as a basis for HSD17B13 variants disrupting function. Two series of inhibitors interact with the active site residues and the bound cofactor similarly, yet they occupy different paths leading to the active site. These structures provide ideas for structure-based design of inhibitors that may be used in the treatment of liver disease.
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spelling pubmed-104498482023-08-26 Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13 Liu, Shenping Sommese, Ruth F. Nedoma, Nicole L. Stevens, Lucy Mae Dutra, Jason K. Zhang, Liying Edmonds, David J. Wang, Yang Garnsey, Michelle Clasquin, Michelle F. Nat Commun Article Hydroxysteroid 17-beta-dehydrogenase 13 (HSD17B13) is a hepatic lipid droplet-associated enzyme that is upregulated in patients with non-alcoholic fatty liver disease. Recently, there have been several reports that predicted loss of function variants in HSD17B13 protect against the progression of steatosis to non-alcoholic steatohepatitis with fibrosis and hepatocellular carcinoma. Here we report crystal structures of full length HSD17B13 in complex with its NAD(+) cofactor, and with lipid/detergent molecules and small molecule inhibitors from two distinct series in the ligand binding pocket. These structures provide insights into a mechanism for lipid droplet-associated proteins anchoring to membranes as well as a basis for HSD17B13 variants disrupting function. Two series of inhibitors interact with the active site residues and the bound cofactor similarly, yet they occupy different paths leading to the active site. These structures provide ideas for structure-based design of inhibitors that may be used in the treatment of liver disease. Nature Publishing Group UK 2023-08-24 /pmc/articles/PMC10449848/ /pubmed/37620305 http://dx.doi.org/10.1038/s41467-023-40766-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Liu, Shenping
Sommese, Ruth F.
Nedoma, Nicole L.
Stevens, Lucy Mae
Dutra, Jason K.
Zhang, Liying
Edmonds, David J.
Wang, Yang
Garnsey, Michelle
Clasquin, Michelle F.
Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13
title Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13
title_full Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13
title_fullStr Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13
title_full_unstemmed Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13
title_short Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13
title_sort structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10449848/
https://www.ncbi.nlm.nih.gov/pubmed/37620305
http://dx.doi.org/10.1038/s41467-023-40766-0
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