PLASMe: a tool to identify PLASMid contigs from short-read assemblies using transformer

Plasmids are mobile genetic elements that carry important accessory genes. Cataloging plasmids is a fundamental step to elucidate their roles in promoting horizontal gene transfer between bacteria. Next generation sequencing (NGS) is the main source for discovering new plasmids today. However, NGS a...

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Detalles Bibliográficos
Autores principales: Tang, Xubo, Shang, Jiayu, Ji, Yongxin, Sun, Yanni
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Methods Online
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10450166/
https://www.ncbi.nlm.nih.gov/pubmed/37427782
http://dx.doi.org/10.1093/nar/gkad578

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10450166/
https://www.ncbi.nlm.nih.gov/pubmed/37427782
http://dx.doi.org/10.1093/nar/gkad578

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