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sRNAfrag: A pipeline and suite of tools to analyze fragmentation in small RNA sequencing data

Fragments derived from small RNAs such as small nucleolar RNAs hold biological relevance. However, they remain poorly understood, calling for more comprehensive methods for analysis. We developed sRNAfrag, a standardized workflow and set of scripts to quantify and analyze sRNA fragmentation of any b...

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Detalles Bibliográficos
Autores principales: Nakatsu, Ken, Jijiwa, Mayumi, Khadka, Vedbar, Nasu, Masaki, Huo, Matthew, Deng, Youping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10473647/
https://www.ncbi.nlm.nih.gov/pubmed/37662282
http://dx.doi.org/10.1101/2023.08.19.553943