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An efficient cloning method to expand vector and restriction site compatibility of Golden Gate Assembly

Golden Gate Assembly is an efficient and rapid cloning method but requires dedicated vectors. Here, we modified Golden Gate to expand its compatibility to a broader range of destination vectors while maintaining its strengths. Our Expanded Golden Gate (ExGG) assembly adds to the insert(s) type IIS r...

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Detalles Bibliográficos
Autores principales: Sorida, Masato, Bonasio, Roberto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10475842/
https://www.ncbi.nlm.nih.gov/pubmed/37671021
http://dx.doi.org/10.1016/j.crmeth.2023.100564
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author Sorida, Masato
Bonasio, Roberto
author_facet Sorida, Masato
Bonasio, Roberto
author_sort Sorida, Masato
collection PubMed
description Golden Gate Assembly is an efficient and rapid cloning method but requires dedicated vectors. Here, we modified Golden Gate to expand its compatibility to a broader range of destination vectors while maintaining its strengths. Our Expanded Golden Gate (ExGG) assembly adds to the insert(s) type IIS restriction sites that generate protruding ends compatible with traditional type IIP sites on the recipient vector. The ligated product cannot be cleaved again, owing to a single-base change near the junction. This allows the reaction to proceed in a single tube without an intermediate purification step. ExGG can be used to introduce multiple fragments into a vector simultaneously, including shorter fragments (<100 bp) and fragments with shared sequences, which can be difficult to assemble with other fast cloning strategies. Thus, ExGG extends the convenience of Golden Gate to a much larger space of pre-existing vectors designed for conventional cloning.
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spelling pubmed-104758422023-09-05 An efficient cloning method to expand vector and restriction site compatibility of Golden Gate Assembly Sorida, Masato Bonasio, Roberto Cell Rep Methods Report Golden Gate Assembly is an efficient and rapid cloning method but requires dedicated vectors. Here, we modified Golden Gate to expand its compatibility to a broader range of destination vectors while maintaining its strengths. Our Expanded Golden Gate (ExGG) assembly adds to the insert(s) type IIS restriction sites that generate protruding ends compatible with traditional type IIP sites on the recipient vector. The ligated product cannot be cleaved again, owing to a single-base change near the junction. This allows the reaction to proceed in a single tube without an intermediate purification step. ExGG can be used to introduce multiple fragments into a vector simultaneously, including shorter fragments (<100 bp) and fragments with shared sequences, which can be difficult to assemble with other fast cloning strategies. Thus, ExGG extends the convenience of Golden Gate to a much larger space of pre-existing vectors designed for conventional cloning. Elsevier 2023-08-22 /pmc/articles/PMC10475842/ /pubmed/37671021 http://dx.doi.org/10.1016/j.crmeth.2023.100564 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Report
Sorida, Masato
Bonasio, Roberto
An efficient cloning method to expand vector and restriction site compatibility of Golden Gate Assembly
title An efficient cloning method to expand vector and restriction site compatibility of Golden Gate Assembly
title_full An efficient cloning method to expand vector and restriction site compatibility of Golden Gate Assembly
title_fullStr An efficient cloning method to expand vector and restriction site compatibility of Golden Gate Assembly
title_full_unstemmed An efficient cloning method to expand vector and restriction site compatibility of Golden Gate Assembly
title_short An efficient cloning method to expand vector and restriction site compatibility of Golden Gate Assembly
title_sort efficient cloning method to expand vector and restriction site compatibility of golden gate assembly
topic Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10475842/
https://www.ncbi.nlm.nih.gov/pubmed/37671021
http://dx.doi.org/10.1016/j.crmeth.2023.100564
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