PyDESeq2: a python package for bulk RNA-seq differential expression analysis

SUMMARY: We present PyDESeq2, a python implementation of the DESeq2 workflow for differential expression analysis on bulk RNA-seq data. This re-implementation yields similar, but not identical, results: it achieves higher model likelihood, allows speed improvements on large datasets, as shown in exp...

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Detalles Bibliográficos
Autores principales: Muzellec, Boris, Teleńczuk, Maria, Cabeli, Vincent, Andreux, Mathieu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10502239/
https://www.ncbi.nlm.nih.gov/pubmed/37669147
http://dx.doi.org/10.1093/bioinformatics/btad547

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10502239/
https://www.ncbi.nlm.nih.gov/pubmed/37669147
http://dx.doi.org/10.1093/bioinformatics/btad547

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