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Xenomake: a pipeline for processing and sorting xenograft reads from spatial transcriptomic experiments

Xenograft models are attractive models that mimic human tumor biology and permit one to perturb the tumor microenvironment and study its drug response. Spatially resolved transcriptomics (SRT) provide a powerful way to study the organization of xenograft models, but currently there is a lack of spec...

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Detalles Bibliográficos
Autores principales: Strope, Benjamin S, Pendleton, Katherine E, Bowie, William Z, Echeverria, Gloria V, Zhu, Qian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10508769/
https://www.ncbi.nlm.nih.gov/pubmed/37732227
http://dx.doi.org/10.1101/2023.09.04.556109