The Free Lunch is not over yet—systematic exploration of numerical thresholds in maximum likelihood phylogenetic inference

SUMMARY: Maximum likelihood (ML) is a widely used phylogenetic inference method. ML implementations heavily rely on numerical optimization routines that use internal numerical thresholds to determine convergence. We systematically analyze the impact of these threshold settings on the log-likelihood...

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Detalles Bibliográficos
Autores principales: Haag, Julia, Hübner, Lukas, Kozlov, Alexey M, Stamatakis, Alexandros
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Original Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10518076/
https://www.ncbi.nlm.nih.gov/pubmed/37750068
http://dx.doi.org/10.1093/bioadv/vbad124

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10518076/
https://www.ncbi.nlm.nih.gov/pubmed/37750068
http://dx.doi.org/10.1093/bioadv/vbad124

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