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Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis

Drug targets with genetic support are several-fold more likely to succeed in clinical trials. We introduce a genetic-driven approach based on causal inferences that can inform drug target prioritization, repurposing, and adverse effects of using lipid-lowering agents. Given that a multi-trait approa...

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Detalles Bibliográficos
Autores principales: Kim, Min Seo, Song, Minku, Kim, Beomsu, Shim, Injeong, Kim, Dan Say, Natarajan, Pradeep, Do, Ron, Won, Hong-Hee
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10518515/
https://www.ncbi.nlm.nih.gov/pubmed/37582372
http://dx.doi.org/10.1016/j.xcrm.2023.101112
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author Kim, Min Seo
Song, Minku
Kim, Beomsu
Shim, Injeong
Kim, Dan Say
Natarajan, Pradeep
Do, Ron
Won, Hong-Hee
author_facet Kim, Min Seo
Song, Minku
Kim, Beomsu
Shim, Injeong
Kim, Dan Say
Natarajan, Pradeep
Do, Ron
Won, Hong-Hee
author_sort Kim, Min Seo
collection PubMed
description Drug targets with genetic support are several-fold more likely to succeed in clinical trials. We introduce a genetic-driven approach based on causal inferences that can inform drug target prioritization, repurposing, and adverse effects of using lipid-lowering agents. Given that a multi-trait approach increases the power to detect meaningful variants/genes, we conduct multi-omics and multi-trait analyses, followed by network connectivity investigations, and prioritize 30 potential therapeutic targets for dyslipidemia, including SORT1, PSRC1, CELSR2, PCSK9, HMGCR, APOB, GRN, HFE2, FJX1, C1QTNF1, and SLC5A8. 20% (6/30) of prioritized targets from our hypothesis-free drug target search are either approved or under investigation for dyslipidemia. The prioritized targets are 22-fold higher in likelihood of being approved or under investigation in clinical trials than genome-wide association study (GWAS)-curated targets. Our results demonstrate that the genetic-driven approach used in this study is a promising strategy for prioritizing targets while informing about the potential adverse effects and repurposing opportunities.
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spelling pubmed-105185152023-09-26 Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis Kim, Min Seo Song, Minku Kim, Beomsu Shim, Injeong Kim, Dan Say Natarajan, Pradeep Do, Ron Won, Hong-Hee Cell Rep Med Article Drug targets with genetic support are several-fold more likely to succeed in clinical trials. We introduce a genetic-driven approach based on causal inferences that can inform drug target prioritization, repurposing, and adverse effects of using lipid-lowering agents. Given that a multi-trait approach increases the power to detect meaningful variants/genes, we conduct multi-omics and multi-trait analyses, followed by network connectivity investigations, and prioritize 30 potential therapeutic targets for dyslipidemia, including SORT1, PSRC1, CELSR2, PCSK9, HMGCR, APOB, GRN, HFE2, FJX1, C1QTNF1, and SLC5A8. 20% (6/30) of prioritized targets from our hypothesis-free drug target search are either approved or under investigation for dyslipidemia. The prioritized targets are 22-fold higher in likelihood of being approved or under investigation in clinical trials than genome-wide association study (GWAS)-curated targets. Our results demonstrate that the genetic-driven approach used in this study is a promising strategy for prioritizing targets while informing about the potential adverse effects and repurposing opportunities. Elsevier 2023-08-14 /pmc/articles/PMC10518515/ /pubmed/37582372 http://dx.doi.org/10.1016/j.xcrm.2023.101112 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Kim, Min Seo
Song, Minku
Kim, Beomsu
Shim, Injeong
Kim, Dan Say
Natarajan, Pradeep
Do, Ron
Won, Hong-Hee
Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis
title Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis
title_full Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis
title_fullStr Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis
title_full_unstemmed Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis
title_short Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis
title_sort prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10518515/
https://www.ncbi.nlm.nih.gov/pubmed/37582372
http://dx.doi.org/10.1016/j.xcrm.2023.101112
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