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Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis
Drug targets with genetic support are several-fold more likely to succeed in clinical trials. We introduce a genetic-driven approach based on causal inferences that can inform drug target prioritization, repurposing, and adverse effects of using lipid-lowering agents. Given that a multi-trait approa...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10518515/ https://www.ncbi.nlm.nih.gov/pubmed/37582372 http://dx.doi.org/10.1016/j.xcrm.2023.101112 |
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author | Kim, Min Seo Song, Minku Kim, Beomsu Shim, Injeong Kim, Dan Say Natarajan, Pradeep Do, Ron Won, Hong-Hee |
author_facet | Kim, Min Seo Song, Minku Kim, Beomsu Shim, Injeong Kim, Dan Say Natarajan, Pradeep Do, Ron Won, Hong-Hee |
author_sort | Kim, Min Seo |
collection | PubMed |
description | Drug targets with genetic support are several-fold more likely to succeed in clinical trials. We introduce a genetic-driven approach based on causal inferences that can inform drug target prioritization, repurposing, and adverse effects of using lipid-lowering agents. Given that a multi-trait approach increases the power to detect meaningful variants/genes, we conduct multi-omics and multi-trait analyses, followed by network connectivity investigations, and prioritize 30 potential therapeutic targets for dyslipidemia, including SORT1, PSRC1, CELSR2, PCSK9, HMGCR, APOB, GRN, HFE2, FJX1, C1QTNF1, and SLC5A8. 20% (6/30) of prioritized targets from our hypothesis-free drug target search are either approved or under investigation for dyslipidemia. The prioritized targets are 22-fold higher in likelihood of being approved or under investigation in clinical trials than genome-wide association study (GWAS)-curated targets. Our results demonstrate that the genetic-driven approach used in this study is a promising strategy for prioritizing targets while informing about the potential adverse effects and repurposing opportunities. |
format | Online Article Text |
id | pubmed-10518515 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-105185152023-09-26 Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis Kim, Min Seo Song, Minku Kim, Beomsu Shim, Injeong Kim, Dan Say Natarajan, Pradeep Do, Ron Won, Hong-Hee Cell Rep Med Article Drug targets with genetic support are several-fold more likely to succeed in clinical trials. We introduce a genetic-driven approach based on causal inferences that can inform drug target prioritization, repurposing, and adverse effects of using lipid-lowering agents. Given that a multi-trait approach increases the power to detect meaningful variants/genes, we conduct multi-omics and multi-trait analyses, followed by network connectivity investigations, and prioritize 30 potential therapeutic targets for dyslipidemia, including SORT1, PSRC1, CELSR2, PCSK9, HMGCR, APOB, GRN, HFE2, FJX1, C1QTNF1, and SLC5A8. 20% (6/30) of prioritized targets from our hypothesis-free drug target search are either approved or under investigation for dyslipidemia. The prioritized targets are 22-fold higher in likelihood of being approved or under investigation in clinical trials than genome-wide association study (GWAS)-curated targets. Our results demonstrate that the genetic-driven approach used in this study is a promising strategy for prioritizing targets while informing about the potential adverse effects and repurposing opportunities. Elsevier 2023-08-14 /pmc/articles/PMC10518515/ /pubmed/37582372 http://dx.doi.org/10.1016/j.xcrm.2023.101112 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Kim, Min Seo Song, Minku Kim, Beomsu Shim, Injeong Kim, Dan Say Natarajan, Pradeep Do, Ron Won, Hong-Hee Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis |
title | Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis |
title_full | Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis |
title_fullStr | Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis |
title_full_unstemmed | Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis |
title_short | Prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis |
title_sort | prioritization of therapeutic targets for dyslipidemia using integrative multi-omics and multi-trait analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10518515/ https://www.ncbi.nlm.nih.gov/pubmed/37582372 http://dx.doi.org/10.1016/j.xcrm.2023.101112 |
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