Cargando…

TERTmonitor—qPCR Detection of TERTp Mutations in Glioma

Telomerase promoter (TERTp) mutations are frequently observed in various types of tumours and commonly characterised by two specific hotspots located at positions −124 and −146 upstream of the start codon. They enhance TERTp activity, resulting in increased TERT expression. In central nervous system...

Descripción completa

Detalles Bibliográficos
Autores principales: Brás, João Paulo, Jesus, Tito Teles, Prazeres, Hugo, Lima, Jorge, Soares, Paula, Vinagre, João
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10530400/
https://www.ncbi.nlm.nih.gov/pubmed/37761833
http://dx.doi.org/10.3390/genes14091693
_version_ 1785111511619862528
author Brás, João Paulo
Jesus, Tito Teles
Prazeres, Hugo
Lima, Jorge
Soares, Paula
Vinagre, João
author_facet Brás, João Paulo
Jesus, Tito Teles
Prazeres, Hugo
Lima, Jorge
Soares, Paula
Vinagre, João
author_sort Brás, João Paulo
collection PubMed
description Telomerase promoter (TERTp) mutations are frequently observed in various types of tumours and commonly characterised by two specific hotspots located at positions −124 and −146 upstream of the start codon. They enhance TERTp activity, resulting in increased TERT expression. In central nervous system (CNS) tumours, they are integrated as biomarkers, aiding in the diagnosis and with a role in prognosis, where, in some settings, they are associated with aggressive behaviour. In this study, we evaluated the performance of TERTmonitor for TERTp genotyping in a series of 185 gliomas in comparison to the traditional method, Sanger sequencing. Against the gold-standard Sanger method, TERTmonitor performed with a 97.8% accuracy. Inaccuracy was mainly due to the over-detection of variants in negative cases (by Sanger) and the presence of variants that can modify the chemistry of the probe detection. The distribution of the mutations was comparable to other series, with the −124 being the most represented (38.92% for Sanger and TERTmonitor) and more prevalent in the higher-grade tumours, gliosarcoma (50.00%) and glioblastoma (52.6%). The non-matched cases are debatable, as we may be dealing with the reduced sensitivity of Sanger in detecting rare alleles, which strengthens the use of the TERTmonitor. With this study, we present a reliable and rapid potential tool for TERTp genotyping in gliomas.
format Online
Article
Text
id pubmed-10530400
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-105304002023-09-28 TERTmonitor—qPCR Detection of TERTp Mutations in Glioma Brás, João Paulo Jesus, Tito Teles Prazeres, Hugo Lima, Jorge Soares, Paula Vinagre, João Genes (Basel) Article Telomerase promoter (TERTp) mutations are frequently observed in various types of tumours and commonly characterised by two specific hotspots located at positions −124 and −146 upstream of the start codon. They enhance TERTp activity, resulting in increased TERT expression. In central nervous system (CNS) tumours, they are integrated as biomarkers, aiding in the diagnosis and with a role in prognosis, where, in some settings, they are associated with aggressive behaviour. In this study, we evaluated the performance of TERTmonitor for TERTp genotyping in a series of 185 gliomas in comparison to the traditional method, Sanger sequencing. Against the gold-standard Sanger method, TERTmonitor performed with a 97.8% accuracy. Inaccuracy was mainly due to the over-detection of variants in negative cases (by Sanger) and the presence of variants that can modify the chemistry of the probe detection. The distribution of the mutations was comparable to other series, with the −124 being the most represented (38.92% for Sanger and TERTmonitor) and more prevalent in the higher-grade tumours, gliosarcoma (50.00%) and glioblastoma (52.6%). The non-matched cases are debatable, as we may be dealing with the reduced sensitivity of Sanger in detecting rare alleles, which strengthens the use of the TERTmonitor. With this study, we present a reliable and rapid potential tool for TERTp genotyping in gliomas. MDPI 2023-08-25 /pmc/articles/PMC10530400/ /pubmed/37761833 http://dx.doi.org/10.3390/genes14091693 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Brás, João Paulo
Jesus, Tito Teles
Prazeres, Hugo
Lima, Jorge
Soares, Paula
Vinagre, João
TERTmonitor—qPCR Detection of TERTp Mutations in Glioma
title TERTmonitor—qPCR Detection of TERTp Mutations in Glioma
title_full TERTmonitor—qPCR Detection of TERTp Mutations in Glioma
title_fullStr TERTmonitor—qPCR Detection of TERTp Mutations in Glioma
title_full_unstemmed TERTmonitor—qPCR Detection of TERTp Mutations in Glioma
title_short TERTmonitor—qPCR Detection of TERTp Mutations in Glioma
title_sort tertmonitor—qpcr detection of tertp mutations in glioma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10530400/
https://www.ncbi.nlm.nih.gov/pubmed/37761833
http://dx.doi.org/10.3390/genes14091693
work_keys_str_mv AT brasjoaopaulo tertmonitorqpcrdetectionoftertpmutationsinglioma
AT jesustitoteles tertmonitorqpcrdetectionoftertpmutationsinglioma
AT prazereshugo tertmonitorqpcrdetectionoftertpmutationsinglioma
AT limajorge tertmonitorqpcrdetectionoftertpmutationsinglioma
AT soarespaula tertmonitorqpcrdetectionoftertpmutationsinglioma
AT vinagrejoao tertmonitorqpcrdetectionoftertpmutationsinglioma