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Lineage commitment of dermal fibroblast progenitors is controlled by Kdm6b‐mediated chromatin demethylation

Dermal Fibroblast Progenitors (DFPs) differentiate into distinct fibroblast lineages during skin development. However, the epigenetic mechanisms that regulate DFP differentiation are not known. Our objective was to use multimodal single‐cell approaches, epigenetic assays, and allografting techniques...

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Autores principales: Phan, Quan M, Salz, Lucia, Kindl, Sam S, Lopez, Jayden S, Thompson, Sean M, Makkar, Jasson, Driskell, Iwona M, Driskell, Ryan R
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10548174/
https://www.ncbi.nlm.nih.gov/pubmed/37602956
http://dx.doi.org/10.15252/embj.2023113880
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author Phan, Quan M
Salz, Lucia
Kindl, Sam S
Lopez, Jayden S
Thompson, Sean M
Makkar, Jasson
Driskell, Iwona M
Driskell, Ryan R
author_facet Phan, Quan M
Salz, Lucia
Kindl, Sam S
Lopez, Jayden S
Thompson, Sean M
Makkar, Jasson
Driskell, Iwona M
Driskell, Ryan R
author_sort Phan, Quan M
collection PubMed
description Dermal Fibroblast Progenitors (DFPs) differentiate into distinct fibroblast lineages during skin development. However, the epigenetic mechanisms that regulate DFP differentiation are not known. Our objective was to use multimodal single‐cell approaches, epigenetic assays, and allografting techniques to define a DFP state and the mechanism that governs its differentiation potential. Our initial results indicated that the overall transcription profile of DFPs is repressed by H3K27me3 and has inaccessible chromatin at lineage‐specific genes. Surprisingly, the repressive chromatin profile of DFPs renders them unable to reform the skin in allograft assays despite their multipotent potential. We hypothesized that chromatin derepression was modulated by the H3K27me3 demethylase, Kdm6b/Jmjd3. Dermal fibroblast–specific deletion of Kdm6b/Jmjd3 in mice resulted in adipocyte compartment ablation and inhibition of mature dermal papilla functions, confirmed by additional single‐cell RNA‐seq, ChIP‐seq, and allografting assays. We conclude that DFPs are functionally derepressed during murine skin development by Kdm6b/Jmjd3. Our studies therefore reveal a multimodal understanding of how DFPs differentiate into distinct fibroblast lineages and provide a novel publicly available multiomics search tool.
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spelling pubmed-105481742023-10-05 Lineage commitment of dermal fibroblast progenitors is controlled by Kdm6b‐mediated chromatin demethylation Phan, Quan M Salz, Lucia Kindl, Sam S Lopez, Jayden S Thompson, Sean M Makkar, Jasson Driskell, Iwona M Driskell, Ryan R EMBO J Articles Dermal Fibroblast Progenitors (DFPs) differentiate into distinct fibroblast lineages during skin development. However, the epigenetic mechanisms that regulate DFP differentiation are not known. Our objective was to use multimodal single‐cell approaches, epigenetic assays, and allografting techniques to define a DFP state and the mechanism that governs its differentiation potential. Our initial results indicated that the overall transcription profile of DFPs is repressed by H3K27me3 and has inaccessible chromatin at lineage‐specific genes. Surprisingly, the repressive chromatin profile of DFPs renders them unable to reform the skin in allograft assays despite their multipotent potential. We hypothesized that chromatin derepression was modulated by the H3K27me3 demethylase, Kdm6b/Jmjd3. Dermal fibroblast–specific deletion of Kdm6b/Jmjd3 in mice resulted in adipocyte compartment ablation and inhibition of mature dermal papilla functions, confirmed by additional single‐cell RNA‐seq, ChIP‐seq, and allografting assays. We conclude that DFPs are functionally derepressed during murine skin development by Kdm6b/Jmjd3. Our studies therefore reveal a multimodal understanding of how DFPs differentiate into distinct fibroblast lineages and provide a novel publicly available multiomics search tool. John Wiley and Sons Inc. 2023-08-21 /pmc/articles/PMC10548174/ /pubmed/37602956 http://dx.doi.org/10.15252/embj.2023113880 Text en © 2023 The Authors. Published under the terms of the CC BY 4.0 license https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Phan, Quan M
Salz, Lucia
Kindl, Sam S
Lopez, Jayden S
Thompson, Sean M
Makkar, Jasson
Driskell, Iwona M
Driskell, Ryan R
Lineage commitment of dermal fibroblast progenitors is controlled by Kdm6b‐mediated chromatin demethylation
title Lineage commitment of dermal fibroblast progenitors is controlled by Kdm6b‐mediated chromatin demethylation
title_full Lineage commitment of dermal fibroblast progenitors is controlled by Kdm6b‐mediated chromatin demethylation
title_fullStr Lineage commitment of dermal fibroblast progenitors is controlled by Kdm6b‐mediated chromatin demethylation
title_full_unstemmed Lineage commitment of dermal fibroblast progenitors is controlled by Kdm6b‐mediated chromatin demethylation
title_short Lineage commitment of dermal fibroblast progenitors is controlled by Kdm6b‐mediated chromatin demethylation
title_sort lineage commitment of dermal fibroblast progenitors is controlled by kdm6b‐mediated chromatin demethylation
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10548174/
https://www.ncbi.nlm.nih.gov/pubmed/37602956
http://dx.doi.org/10.15252/embj.2023113880
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