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Catalyst: Fast and flexible modeling of reaction networks

We introduce Catalyst.jl, a flexible and feature-filled Julia library for modeling and high-performance simulation of chemical reaction networks (CRNs). Catalyst supports simulating stochastic chemical kinetics (jump process), chemical Langevin equation (stochastic differential equation), and reacti...

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Detalles Bibliográficos
Autores principales: Loman, Torkel E., Ma, Yingbo, Ilin, Vasily, Gowda, Shashi, Korsbo, Niklas, Yewale, Nikhil, Rackauckas, Chris, Isaacson, Samuel A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10584191/
https://www.ncbi.nlm.nih.gov/pubmed/37851697
http://dx.doi.org/10.1371/journal.pcbi.1011530