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Spatial single-cell sequencing of meiosis I arrested oocytes indicates acquisition of maternal transcripts from the soma

Maternal RNAs are stored from minutes to decades in oocytes throughout meiosis I arrest in a transcriptionally quiescent state. Recent reports, however, propose a role for nascent transcription in arrested oocytes. Whether arrested oocytes launch nascent transcription in response to environmental or...

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Autores principales: Trimmer, Kenneth A., Zhao, Peisen, Seemann, Jacob, Chen, Shin-Yu, Mondal, Sudip, Ben-Yakar, Adela, Arur, Swathi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10592488/
https://www.ncbi.nlm.nih.gov/pubmed/37227820
http://dx.doi.org/10.1016/j.celrep.2023.112544
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author Trimmer, Kenneth A.
Zhao, Peisen
Seemann, Jacob
Chen, Shin-Yu
Mondal, Sudip
Ben-Yakar, Adela
Arur, Swathi
author_facet Trimmer, Kenneth A.
Zhao, Peisen
Seemann, Jacob
Chen, Shin-Yu
Mondal, Sudip
Ben-Yakar, Adela
Arur, Swathi
author_sort Trimmer, Kenneth A.
collection PubMed
description Maternal RNAs are stored from minutes to decades in oocytes throughout meiosis I arrest in a transcriptionally quiescent state. Recent reports, however, propose a role for nascent transcription in arrested oocytes. Whether arrested oocytes launch nascent transcription in response to environmental or hormonal signals while maintaining the meiosis I arrest remains undetermined. We test this by integrating single-cell RNA sequencing, RNA velocity, and RNA fluorescence in situ hybridization on C. elegans meiosis I arrested oocytes. We identify transcripts that increase as the arrested meiosis I oocyte ages, but rule out extracellular signaling through ERK MAPK and nascent transcription as a mechanism for this increase. We report transcript acquisition from neighboring somatic cells as a mechanism of transcript increase during meiosis I arrest. These analyses provide a deeper view at single-cell resolution of the RNA landscape of a meiosis I arrested oocyte and as it prepares for oocyte maturation and fertilization.
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spelling pubmed-105924882023-10-23 Spatial single-cell sequencing of meiosis I arrested oocytes indicates acquisition of maternal transcripts from the soma Trimmer, Kenneth A. Zhao, Peisen Seemann, Jacob Chen, Shin-Yu Mondal, Sudip Ben-Yakar, Adela Arur, Swathi Cell Rep Article Maternal RNAs are stored from minutes to decades in oocytes throughout meiosis I arrest in a transcriptionally quiescent state. Recent reports, however, propose a role for nascent transcription in arrested oocytes. Whether arrested oocytes launch nascent transcription in response to environmental or hormonal signals while maintaining the meiosis I arrest remains undetermined. We test this by integrating single-cell RNA sequencing, RNA velocity, and RNA fluorescence in situ hybridization on C. elegans meiosis I arrested oocytes. We identify transcripts that increase as the arrested meiosis I oocyte ages, but rule out extracellular signaling through ERK MAPK and nascent transcription as a mechanism for this increase. We report transcript acquisition from neighboring somatic cells as a mechanism of transcript increase during meiosis I arrest. These analyses provide a deeper view at single-cell resolution of the RNA landscape of a meiosis I arrested oocyte and as it prepares for oocyte maturation and fertilization. 2023-06-27 2023-05-24 /pmc/articles/PMC10592488/ /pubmed/37227820 http://dx.doi.org/10.1016/j.celrep.2023.112544 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) ).
spellingShingle Article
Trimmer, Kenneth A.
Zhao, Peisen
Seemann, Jacob
Chen, Shin-Yu
Mondal, Sudip
Ben-Yakar, Adela
Arur, Swathi
Spatial single-cell sequencing of meiosis I arrested oocytes indicates acquisition of maternal transcripts from the soma
title Spatial single-cell sequencing of meiosis I arrested oocytes indicates acquisition of maternal transcripts from the soma
title_full Spatial single-cell sequencing of meiosis I arrested oocytes indicates acquisition of maternal transcripts from the soma
title_fullStr Spatial single-cell sequencing of meiosis I arrested oocytes indicates acquisition of maternal transcripts from the soma
title_full_unstemmed Spatial single-cell sequencing of meiosis I arrested oocytes indicates acquisition of maternal transcripts from the soma
title_short Spatial single-cell sequencing of meiosis I arrested oocytes indicates acquisition of maternal transcripts from the soma
title_sort spatial single-cell sequencing of meiosis i arrested oocytes indicates acquisition of maternal transcripts from the soma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10592488/
https://www.ncbi.nlm.nih.gov/pubmed/37227820
http://dx.doi.org/10.1016/j.celrep.2023.112544
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