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Single-cell gene set scoring with nearest neighbor graph smoothed data (gssnng)

SUMMARY: Gene set scoring (or enrichment) is a common dimension reduction task in bioinformatics that can be focused on the differences between groups or at the single sample level. Gene sets can represent biological functions, molecular pathways, cell identities, and more. Gene set scores are conte...

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Detalles Bibliográficos
Autores principales: Gibbs, David L, Strasser, Michael K, Huang, Sui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10599965/
https://www.ncbi.nlm.nih.gov/pubmed/37886712
http://dx.doi.org/10.1093/bioadv/vbad150