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PanKmer: k-mer-based and reference-free pangenome analysis
SUMMARY: Pangenomes are replacing single reference genomes as the definitive representation of DNA sequence within a species or clade. Pangenome analysis predominantly leverages graph-based methods that require computationally intensive multiple genome alignments, do not scale to highly complex euka...
Autores principales: | Aylward, Anthony J, Petrus, Semar, Mamerto, Allen, Hartwick, Nolan T, Michael, Todd P |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10603592/ https://www.ncbi.nlm.nih.gov/pubmed/37846049 http://dx.doi.org/10.1093/bioinformatics/btad621 |
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