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The Rising Role of Omics and Meta-Omics in Table Olive Research

Table olives are often the result of fermentation, a process where microorganisms transform raw materials into the final product. The microbial community can significantly impact the organoleptic characteristics and safety of table olives, and it is influenced by various factors, including the proce...

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Autores principales: Tsoungos, Anastasios, Pemaj, Violeta, Slavko, Aleksandra, Kapolos, John, Papadelli, Marina, Papadimitriou, Konstantinos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10606081/
https://www.ncbi.nlm.nih.gov/pubmed/37893676
http://dx.doi.org/10.3390/foods12203783
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author Tsoungos, Anastasios
Pemaj, Violeta
Slavko, Aleksandra
Kapolos, John
Papadelli, Marina
Papadimitriou, Konstantinos
author_facet Tsoungos, Anastasios
Pemaj, Violeta
Slavko, Aleksandra
Kapolos, John
Papadelli, Marina
Papadimitriou, Konstantinos
author_sort Tsoungos, Anastasios
collection PubMed
description Table olives are often the result of fermentation, a process where microorganisms transform raw materials into the final product. The microbial community can significantly impact the organoleptic characteristics and safety of table olives, and it is influenced by various factors, including the processing methods. Traditional culture-dependent techniques capture only a fraction of table olives’ intricate microbiota, prompting a shift toward culture-independent methods to address this knowledge gap. This review explores recent advances in table olive research through omics and meta-omics approaches. Genomic analysis of microorganisms isolated from table olives has revealed multiple genes linked to technological and probiotic attributes. An increasing number of studies concern metagenomics and metabolomics analyses of table olives. The former offers comprehensive insights into microbial diversity and function, while the latter identifies aroma and flavor determinants. Although proteomics and transcriptomics studies remain limited in the field, they have the potential to reveal deeper layers of table olives’ microbiome composition and functionality. Despite the challenges associated with implementing multi-omics approaches, such as the reliance on advanced bioinformatics tools and computational resources, they hold the promise of groundbreaking advances in table olive processing technology.
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spelling pubmed-106060812023-10-28 The Rising Role of Omics and Meta-Omics in Table Olive Research Tsoungos, Anastasios Pemaj, Violeta Slavko, Aleksandra Kapolos, John Papadelli, Marina Papadimitriou, Konstantinos Foods Review Table olives are often the result of fermentation, a process where microorganisms transform raw materials into the final product. The microbial community can significantly impact the organoleptic characteristics and safety of table olives, and it is influenced by various factors, including the processing methods. Traditional culture-dependent techniques capture only a fraction of table olives’ intricate microbiota, prompting a shift toward culture-independent methods to address this knowledge gap. This review explores recent advances in table olive research through omics and meta-omics approaches. Genomic analysis of microorganisms isolated from table olives has revealed multiple genes linked to technological and probiotic attributes. An increasing number of studies concern metagenomics and metabolomics analyses of table olives. The former offers comprehensive insights into microbial diversity and function, while the latter identifies aroma and flavor determinants. Although proteomics and transcriptomics studies remain limited in the field, they have the potential to reveal deeper layers of table olives’ microbiome composition and functionality. Despite the challenges associated with implementing multi-omics approaches, such as the reliance on advanced bioinformatics tools and computational resources, they hold the promise of groundbreaking advances in table olive processing technology. MDPI 2023-10-15 /pmc/articles/PMC10606081/ /pubmed/37893676 http://dx.doi.org/10.3390/foods12203783 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Tsoungos, Anastasios
Pemaj, Violeta
Slavko, Aleksandra
Kapolos, John
Papadelli, Marina
Papadimitriou, Konstantinos
The Rising Role of Omics and Meta-Omics in Table Olive Research
title The Rising Role of Omics and Meta-Omics in Table Olive Research
title_full The Rising Role of Omics and Meta-Omics in Table Olive Research
title_fullStr The Rising Role of Omics and Meta-Omics in Table Olive Research
title_full_unstemmed The Rising Role of Omics and Meta-Omics in Table Olive Research
title_short The Rising Role of Omics and Meta-Omics in Table Olive Research
title_sort rising role of omics and meta-omics in table olive research
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10606081/
https://www.ncbi.nlm.nih.gov/pubmed/37893676
http://dx.doi.org/10.3390/foods12203783
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