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Genetic overlap for ten cardiovascular diseases: A comprehensive gene-centric pleiotropic association analysis and Mendelian randomization study

Recent studies suggest that pleiotropic effects may explain the genetic architecture of cardiovascular diseases (CVDs). We conducted a comprehensive gene-centric pleiotropic association analysis for ten CVDs using genome-wide association study (GWAS) summary statistics to identify pleiotropic genes...

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Autores principales: Liu, Zeye, Xu, Jing, Tan, Jiangshan, Li, Xiaofei, Zhang, Fengwen, Ouyang, Wenbin, Wang, Shouzheng, Huang, Yuan, Li, Shoujun, Pan, Xiangbin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10613921/
https://www.ncbi.nlm.nih.gov/pubmed/37908310
http://dx.doi.org/10.1016/j.isci.2023.108150
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author Liu, Zeye
Xu, Jing
Tan, Jiangshan
Li, Xiaofei
Zhang, Fengwen
Ouyang, Wenbin
Wang, Shouzheng
Huang, Yuan
Li, Shoujun
Pan, Xiangbin
author_facet Liu, Zeye
Xu, Jing
Tan, Jiangshan
Li, Xiaofei
Zhang, Fengwen
Ouyang, Wenbin
Wang, Shouzheng
Huang, Yuan
Li, Shoujun
Pan, Xiangbin
author_sort Liu, Zeye
collection PubMed
description Recent studies suggest that pleiotropic effects may explain the genetic architecture of cardiovascular diseases (CVDs). We conducted a comprehensive gene-centric pleiotropic association analysis for ten CVDs using genome-wide association study (GWAS) summary statistics to identify pleiotropic genes and pathways that may underlie multiple CVDs. We found shared genetic mechanisms underlying the pathophysiology of CVDs, with over two-thirds of the diseases exhibiting common genes and single-nucleotide polymorphisms (SNPs). Significant positive genetic correlations were observed in more than half of paired CVDs. Additionally, we investigated the pleiotropic genes shared between different CVDs, as well as their functional pathways and distribution in different tissues. Moreover, six hub genes, including ALDH2, XPO1, HSPA1L, ESR2, WDR12, and RAB1A, as well as 26 targeted potential drugs, were identified. Our study provides further evidence for the pleiotropic effects of genetic variants on CVDs and highlights the importance of considering pleiotropy in genetic association studies.
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spelling pubmed-106139212023-10-31 Genetic overlap for ten cardiovascular diseases: A comprehensive gene-centric pleiotropic association analysis and Mendelian randomization study Liu, Zeye Xu, Jing Tan, Jiangshan Li, Xiaofei Zhang, Fengwen Ouyang, Wenbin Wang, Shouzheng Huang, Yuan Li, Shoujun Pan, Xiangbin iScience Article Recent studies suggest that pleiotropic effects may explain the genetic architecture of cardiovascular diseases (CVDs). We conducted a comprehensive gene-centric pleiotropic association analysis for ten CVDs using genome-wide association study (GWAS) summary statistics to identify pleiotropic genes and pathways that may underlie multiple CVDs. We found shared genetic mechanisms underlying the pathophysiology of CVDs, with over two-thirds of the diseases exhibiting common genes and single-nucleotide polymorphisms (SNPs). Significant positive genetic correlations were observed in more than half of paired CVDs. Additionally, we investigated the pleiotropic genes shared between different CVDs, as well as their functional pathways and distribution in different tissues. Moreover, six hub genes, including ALDH2, XPO1, HSPA1L, ESR2, WDR12, and RAB1A, as well as 26 targeted potential drugs, were identified. Our study provides further evidence for the pleiotropic effects of genetic variants on CVDs and highlights the importance of considering pleiotropy in genetic association studies. Elsevier 2023-10-06 /pmc/articles/PMC10613921/ /pubmed/37908310 http://dx.doi.org/10.1016/j.isci.2023.108150 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Liu, Zeye
Xu, Jing
Tan, Jiangshan
Li, Xiaofei
Zhang, Fengwen
Ouyang, Wenbin
Wang, Shouzheng
Huang, Yuan
Li, Shoujun
Pan, Xiangbin
Genetic overlap for ten cardiovascular diseases: A comprehensive gene-centric pleiotropic association analysis and Mendelian randomization study
title Genetic overlap for ten cardiovascular diseases: A comprehensive gene-centric pleiotropic association analysis and Mendelian randomization study
title_full Genetic overlap for ten cardiovascular diseases: A comprehensive gene-centric pleiotropic association analysis and Mendelian randomization study
title_fullStr Genetic overlap for ten cardiovascular diseases: A comprehensive gene-centric pleiotropic association analysis and Mendelian randomization study
title_full_unstemmed Genetic overlap for ten cardiovascular diseases: A comprehensive gene-centric pleiotropic association analysis and Mendelian randomization study
title_short Genetic overlap for ten cardiovascular diseases: A comprehensive gene-centric pleiotropic association analysis and Mendelian randomization study
title_sort genetic overlap for ten cardiovascular diseases: a comprehensive gene-centric pleiotropic association analysis and mendelian randomization study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10613921/
https://www.ncbi.nlm.nih.gov/pubmed/37908310
http://dx.doi.org/10.1016/j.isci.2023.108150
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