Cargando…

Comparing P53 expression and genome-wide transcriptome profiling to Comet assay in lymphocytes from melanoma patients and healthy controls

This study compared the expression of TP53 in lymphocytes from malignant melanoma (MM) patients with positive sentinel nodes to healthy controls (HCs) following exposure to various doses of UVA radiation. The Lymphocyte Genome Sensitivity (LGS) assay indicated significant differences in DNA damage i...

Descripción completa

Detalles Bibliográficos
Autores principales: Najafzadeh, Mojgan, Naeem, Parisa, Ghaderi, Nader, Jafarinejad, Shohreh, Karimi, Zahra, Ghaderi, Mehran, Akhbari, Pouria, Ghaderi, Rojan, Farsi, Pedram, Wright, Andrew, Anderson, Diana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10620420/
https://www.ncbi.nlm.nih.gov/pubmed/37914759
http://dx.doi.org/10.1038/s41598-023-44965-z
_version_ 1785130201895665664
author Najafzadeh, Mojgan
Naeem, Parisa
Ghaderi, Nader
Jafarinejad, Shohreh
Karimi, Zahra
Ghaderi, Mehran
Akhbari, Pouria
Ghaderi, Rojan
Farsi, Pedram
Wright, Andrew
Anderson, Diana
author_facet Najafzadeh, Mojgan
Naeem, Parisa
Ghaderi, Nader
Jafarinejad, Shohreh
Karimi, Zahra
Ghaderi, Mehran
Akhbari, Pouria
Ghaderi, Rojan
Farsi, Pedram
Wright, Andrew
Anderson, Diana
author_sort Najafzadeh, Mojgan
collection PubMed
description This study compared the expression of TP53 in lymphocytes from malignant melanoma (MM) patients with positive sentinel nodes to healthy controls (HCs) following exposure to various doses of UVA radiation. The Lymphocyte Genome Sensitivity (LGS) assay indicated significant differences in DNA damage in lymphocytes between MM patients and HCs. qPCR data demonstrated an overall 3.4-fold increase in TP53 expression in lymphocytes from MM patients compared to healthy controls, following treatment with 0.5 mW/cm(2) UVA radiation. Western blotting confirmed that p53 expression was increased in MM lymphocytes following UVA exposure compared to healthy individuals. Genome transcriptome profiling data displayed differences in gene expression between UVA-treated lymphocytes from MM patients and HCs. Peripheral lymphocytes from MM patients are more susceptible to the genotoxic effects of UVA compared to healthy individuals. Our previous studies showed that UVA exposure of various intensities caused significant differences in the levels of DNA damage between lymphocytes from cancer patients compared to HCs through the LGS assay. The present study’s results provide further credibility to the LGS assay as a screening test for cancer detection. Peripheral lymphocytes could be a promising blood biopsy biomarker for staging of carcinomas and prevention of carcinoma progression at early stages.
format Online
Article
Text
id pubmed-10620420
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-106204202023-11-03 Comparing P53 expression and genome-wide transcriptome profiling to Comet assay in lymphocytes from melanoma patients and healthy controls Najafzadeh, Mojgan Naeem, Parisa Ghaderi, Nader Jafarinejad, Shohreh Karimi, Zahra Ghaderi, Mehran Akhbari, Pouria Ghaderi, Rojan Farsi, Pedram Wright, Andrew Anderson, Diana Sci Rep Article This study compared the expression of TP53 in lymphocytes from malignant melanoma (MM) patients with positive sentinel nodes to healthy controls (HCs) following exposure to various doses of UVA radiation. The Lymphocyte Genome Sensitivity (LGS) assay indicated significant differences in DNA damage in lymphocytes between MM patients and HCs. qPCR data demonstrated an overall 3.4-fold increase in TP53 expression in lymphocytes from MM patients compared to healthy controls, following treatment with 0.5 mW/cm(2) UVA radiation. Western blotting confirmed that p53 expression was increased in MM lymphocytes following UVA exposure compared to healthy individuals. Genome transcriptome profiling data displayed differences in gene expression between UVA-treated lymphocytes from MM patients and HCs. Peripheral lymphocytes from MM patients are more susceptible to the genotoxic effects of UVA compared to healthy individuals. Our previous studies showed that UVA exposure of various intensities caused significant differences in the levels of DNA damage between lymphocytes from cancer patients compared to HCs through the LGS assay. The present study’s results provide further credibility to the LGS assay as a screening test for cancer detection. Peripheral lymphocytes could be a promising blood biopsy biomarker for staging of carcinomas and prevention of carcinoma progression at early stages. Nature Publishing Group UK 2023-11-01 /pmc/articles/PMC10620420/ /pubmed/37914759 http://dx.doi.org/10.1038/s41598-023-44965-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Najafzadeh, Mojgan
Naeem, Parisa
Ghaderi, Nader
Jafarinejad, Shohreh
Karimi, Zahra
Ghaderi, Mehran
Akhbari, Pouria
Ghaderi, Rojan
Farsi, Pedram
Wright, Andrew
Anderson, Diana
Comparing P53 expression and genome-wide transcriptome profiling to Comet assay in lymphocytes from melanoma patients and healthy controls
title Comparing P53 expression and genome-wide transcriptome profiling to Comet assay in lymphocytes from melanoma patients and healthy controls
title_full Comparing P53 expression and genome-wide transcriptome profiling to Comet assay in lymphocytes from melanoma patients and healthy controls
title_fullStr Comparing P53 expression and genome-wide transcriptome profiling to Comet assay in lymphocytes from melanoma patients and healthy controls
title_full_unstemmed Comparing P53 expression and genome-wide transcriptome profiling to Comet assay in lymphocytes from melanoma patients and healthy controls
title_short Comparing P53 expression and genome-wide transcriptome profiling to Comet assay in lymphocytes from melanoma patients and healthy controls
title_sort comparing p53 expression and genome-wide transcriptome profiling to comet assay in lymphocytes from melanoma patients and healthy controls
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10620420/
https://www.ncbi.nlm.nih.gov/pubmed/37914759
http://dx.doi.org/10.1038/s41598-023-44965-z
work_keys_str_mv AT najafzadehmojgan comparingp53expressionandgenomewidetranscriptomeprofilingtocometassayinlymphocytesfrommelanomapatientsandhealthycontrols
AT naeemparisa comparingp53expressionandgenomewidetranscriptomeprofilingtocometassayinlymphocytesfrommelanomapatientsandhealthycontrols
AT ghaderinader comparingp53expressionandgenomewidetranscriptomeprofilingtocometassayinlymphocytesfrommelanomapatientsandhealthycontrols
AT jafarinejadshohreh comparingp53expressionandgenomewidetranscriptomeprofilingtocometassayinlymphocytesfrommelanomapatientsandhealthycontrols
AT karimizahra comparingp53expressionandgenomewidetranscriptomeprofilingtocometassayinlymphocytesfrommelanomapatientsandhealthycontrols
AT ghaderimehran comparingp53expressionandgenomewidetranscriptomeprofilingtocometassayinlymphocytesfrommelanomapatientsandhealthycontrols
AT akhbaripouria comparingp53expressionandgenomewidetranscriptomeprofilingtocometassayinlymphocytesfrommelanomapatientsandhealthycontrols
AT ghaderirojan comparingp53expressionandgenomewidetranscriptomeprofilingtocometassayinlymphocytesfrommelanomapatientsandhealthycontrols
AT farsipedram comparingp53expressionandgenomewidetranscriptomeprofilingtocometassayinlymphocytesfrommelanomapatientsandhealthycontrols
AT wrightandrew comparingp53expressionandgenomewidetranscriptomeprofilingtocometassayinlymphocytesfrommelanomapatientsandhealthycontrols
AT andersondiana comparingp53expressionandgenomewidetranscriptomeprofilingtocometassayinlymphocytesfrommelanomapatientsandhealthycontrols