Cargando…
Refphase: Multi-sample phasing reveals haplotype-specific copy number heterogeneity
Most computational methods that infer somatic copy number alterations (SCNAs) from bulk sequencing of DNA analyse tumour samples individually. However, the sequencing of multiple tumour samples from a patient’s disease is an increasingly common practice. We introduce Refphase, an algorithm that leve...
Autores principales: | Watkins, Thomas B. K., Colliver, Emma C., Huska, Matthew R., Kaufmann, Tom L., Lim, Emilia L., Duncan, Cody B., Haase, Kerstin, Van Loo, Peter, Swanton, Charles, McGranahan, Nicholas, Schwarz, Roland F. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10621967/ https://www.ncbi.nlm.nih.gov/pubmed/37871126 http://dx.doi.org/10.1371/journal.pcbi.1011379 |
Ejemplares similares
-
MEDICC2: whole-genome doubling aware copy-number phylogenies for cancer evolution
por: Kaufmann, Tom L., et al.
Publicado: (2022) -
Analysis of intratumor heterogeneity unravels lung cancer evolution
por: de Bruin, Elza C, et al.
Publicado: (2015) -
Deciphering intratumor heterogeneity and temporal acquisition of driver events to refine precision medicine
por: Hiley, Crispin, et al.
Publicado: (2014) -
Allele-specific multi-sample copy number segmentation in ASCAT
por: Ross, Edith M., et al.
Publicado: (2021) -
deconstructSigs: delineating mutational processes in single tumors distinguishes DNA repair deficiencies and patterns of carcinoma evolution
por: Rosenthal, Rachel, et al.
Publicado: (2016)