Benchmarking assembly free nanopore read mappers to classify complex millipede gut microbiota via Oxford Nanopore Sequencing Technology

Millipedes are key players in recycling leaf litter into soil in tropical ecosystems. To elucidate their gut microbiota, we collected millipedes from different municipalities of Puerto Rico. Here we aim to benchmark which method is best for metagenomic skimming of this highly complex millipede micro...

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Detalles Bibliográficos
Autores principales: Geli-Cruz, Orlando J., Santos-Flores, Carlos J., Cafaro, Matias J., Ropelewski, Alex, Van Dam, Alex R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Journal of Biological Methods 2023
Materias:
Benchmarks
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10627078/
https://www.ncbi.nlm.nih.gov/pubmed/37937256
http://dx.doi.org/10.14440/jbm.2023.376

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10627078/
https://www.ncbi.nlm.nih.gov/pubmed/37937256
http://dx.doi.org/10.14440/jbm.2023.376

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