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Benchmarking assembly free nanopore read mappers to classify complex millipede gut microbiota via Oxford Nanopore Sequencing Technology
Millipedes are key players in recycling leaf litter into soil in tropical ecosystems. To elucidate their gut microbiota, we collected millipedes from different municipalities of Puerto Rico. Here we aim to benchmark which method is best for metagenomic skimming of this highly complex millipede micro...
Autores principales: | Geli-Cruz, Orlando J., Santos-Flores, Carlos J., Cafaro, Matias J., Ropelewski, Alex, Van Dam, Alex R. |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Journal of Biological Methods
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10627078/ https://www.ncbi.nlm.nih.gov/pubmed/37937256 http://dx.doi.org/10.14440/jbm.2023.376 |
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