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LARP1 senses free ribosomes to coordinate supply and demand of ribosomal proteins

Terminal oligopyrimidine motif-containing mRNAs (TOPs) encode all ribosomal proteins in mammals and are regulated to tune ribosome synthesis to cell state. Previous studies implicate LARP1 in 40S- or 80S-ribosome complexes that repress and stabilize TOPs. However, a mechanistic understanding of how...

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Autores principales: Saba, James A., Huang, Zixuan, Schole, Kate L., Ye, Xianwen, Bhatt, Shrey D., Li, Yi, Timp, Winston, Cheng, Jingdong, Green, Rachel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635049/
https://www.ncbi.nlm.nih.gov/pubmed/37961604
http://dx.doi.org/10.1101/2023.11.01.565189
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author Saba, James A.
Huang, Zixuan
Schole, Kate L.
Ye, Xianwen
Bhatt, Shrey D.
Li, Yi
Timp, Winston
Cheng, Jingdong
Green, Rachel
author_facet Saba, James A.
Huang, Zixuan
Schole, Kate L.
Ye, Xianwen
Bhatt, Shrey D.
Li, Yi
Timp, Winston
Cheng, Jingdong
Green, Rachel
author_sort Saba, James A.
collection PubMed
description Terminal oligopyrimidine motif-containing mRNAs (TOPs) encode all ribosomal proteins in mammals and are regulated to tune ribosome synthesis to cell state. Previous studies implicate LARP1 in 40S- or 80S-ribosome complexes that repress and stabilize TOPs. However, a mechanistic understanding of how LARP1 and TOPs interact with these complexes to coordinate TOP outcomes is lacking. Here, we show that LARP1 senses the cellular supply of ribosomes by directly binding non-translating ribosomal subunits. Cryo-EM structures reveal a previously uncharacterized domain of LARP1 bound to and occluding the 40S mRNA channel. Free cytosolic ribosomes induce sequestration of TOPs in repressed 80S-LARP1-TOP complexes independent of alterations in mTOR signaling. Together, this work demonstrates a general ribosome-sensing function of LARP1 that allows it to tune ribosome protein synthesis to cellular demand.
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spelling pubmed-106350492023-11-13 LARP1 senses free ribosomes to coordinate supply and demand of ribosomal proteins Saba, James A. Huang, Zixuan Schole, Kate L. Ye, Xianwen Bhatt, Shrey D. Li, Yi Timp, Winston Cheng, Jingdong Green, Rachel bioRxiv Article Terminal oligopyrimidine motif-containing mRNAs (TOPs) encode all ribosomal proteins in mammals and are regulated to tune ribosome synthesis to cell state. Previous studies implicate LARP1 in 40S- or 80S-ribosome complexes that repress and stabilize TOPs. However, a mechanistic understanding of how LARP1 and TOPs interact with these complexes to coordinate TOP outcomes is lacking. Here, we show that LARP1 senses the cellular supply of ribosomes by directly binding non-translating ribosomal subunits. Cryo-EM structures reveal a previously uncharacterized domain of LARP1 bound to and occluding the 40S mRNA channel. Free cytosolic ribosomes induce sequestration of TOPs in repressed 80S-LARP1-TOP complexes independent of alterations in mTOR signaling. Together, this work demonstrates a general ribosome-sensing function of LARP1 that allows it to tune ribosome protein synthesis to cellular demand. Cold Spring Harbor Laboratory 2023-11-02 /pmc/articles/PMC10635049/ /pubmed/37961604 http://dx.doi.org/10.1101/2023.11.01.565189 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Saba, James A.
Huang, Zixuan
Schole, Kate L.
Ye, Xianwen
Bhatt, Shrey D.
Li, Yi
Timp, Winston
Cheng, Jingdong
Green, Rachel
LARP1 senses free ribosomes to coordinate supply and demand of ribosomal proteins
title LARP1 senses free ribosomes to coordinate supply and demand of ribosomal proteins
title_full LARP1 senses free ribosomes to coordinate supply and demand of ribosomal proteins
title_fullStr LARP1 senses free ribosomes to coordinate supply and demand of ribosomal proteins
title_full_unstemmed LARP1 senses free ribosomes to coordinate supply and demand of ribosomal proteins
title_short LARP1 senses free ribosomes to coordinate supply and demand of ribosomal proteins
title_sort larp1 senses free ribosomes to coordinate supply and demand of ribosomal proteins
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635049/
https://www.ncbi.nlm.nih.gov/pubmed/37961604
http://dx.doi.org/10.1101/2023.11.01.565189
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