aaHash: recursive amino acid sequence hashing

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MOTIVATION: K-mer hashing is a common operation in many foundational bioinformatics problems. However, generic string hashing algorithms are not optimized for this application. Strings in bioinformatics use specific alphabets, a trait leveraged for nucleic acid sequences in earlier work. We note tha...

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Detalles Bibliográficos
Autores principales: Wong, Johnathan, Kazemi, Parham, Coombe, Lauren, Warren, René L, Birol, Inanç
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Application Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10660294/
https://www.ncbi.nlm.nih.gov/pubmed/38023332
http://dx.doi.org/10.1093/bioadv/vbad162

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10660294/
https://www.ncbi.nlm.nih.gov/pubmed/38023332
http://dx.doi.org/10.1093/bioadv/vbad162

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