Cargando…

Multiconfigurational photodynamics simulations reveal the mechanism of photodecarbonylations of cyclopropenones in explicit aqueous environments

Gas-evolving photochemical reactions use light and mild conditions to access strained organic compounds irreversibly. Cyclopropenones are a class of light-responsive molecules used in bioorthogonal photoclick reactions; their excited-state decarbonylation reaction mechanisms are misunderstood due to...

Descripción completa

Detalles Bibliográficos
Autores principales: Adrion, Daniel M., Karunaratne, Waruni V., Lopez, Steven A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10664470/
https://www.ncbi.nlm.nih.gov/pubmed/38023495
http://dx.doi.org/10.1039/d3sc03805j
_version_ 1785138623788613632
author Adrion, Daniel M.
Karunaratne, Waruni V.
Lopez, Steven A.
author_facet Adrion, Daniel M.
Karunaratne, Waruni V.
Lopez, Steven A.
author_sort Adrion, Daniel M.
collection PubMed
description Gas-evolving photochemical reactions use light and mild conditions to access strained organic compounds irreversibly. Cyclopropenones are a class of light-responsive molecules used in bioorthogonal photoclick reactions; their excited-state decarbonylation reaction mechanisms are misunderstood due to their ultrafast (<100 femtosecond) lifetimes. We have combined multiconfigurational quantum mechanical (QM) calculations and non-adiabatic molecular dynamics (NAMD) simulations to uncover the excited-state mechanism of cyclopropenone and a photoprotected cyclooctyne-(COT)-precursor in gaseous and explicit aqueous environments. We explore the role of H-bonding with fully quantum mechanical explicitly solvated NAMD simulations for the decarbonylation reaction. The cyclopropenones pass through asynchronous conical intersections and have dynamically concerted photodecarbonylation mechanisms. The COT-precursor has a higher quantum yield of 55% than cyclopropenone (28%) because these trajectories prefer to break a σ(CC) bond to avoid the strained trans-cyclooctene geometries. Our solvated simulations show an increased quantum yield (58%) for the systems studied here.
format Online
Article
Text
id pubmed-10664470
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher The Royal Society of Chemistry
record_format MEDLINE/PubMed
spelling pubmed-106644702023-11-10 Multiconfigurational photodynamics simulations reveal the mechanism of photodecarbonylations of cyclopropenones in explicit aqueous environments Adrion, Daniel M. Karunaratne, Waruni V. Lopez, Steven A. Chem Sci Chemistry Gas-evolving photochemical reactions use light and mild conditions to access strained organic compounds irreversibly. Cyclopropenones are a class of light-responsive molecules used in bioorthogonal photoclick reactions; their excited-state decarbonylation reaction mechanisms are misunderstood due to their ultrafast (<100 femtosecond) lifetimes. We have combined multiconfigurational quantum mechanical (QM) calculations and non-adiabatic molecular dynamics (NAMD) simulations to uncover the excited-state mechanism of cyclopropenone and a photoprotected cyclooctyne-(COT)-precursor in gaseous and explicit aqueous environments. We explore the role of H-bonding with fully quantum mechanical explicitly solvated NAMD simulations for the decarbonylation reaction. The cyclopropenones pass through asynchronous conical intersections and have dynamically concerted photodecarbonylation mechanisms. The COT-precursor has a higher quantum yield of 55% than cyclopropenone (28%) because these trajectories prefer to break a σ(CC) bond to avoid the strained trans-cyclooctene geometries. Our solvated simulations show an increased quantum yield (58%) for the systems studied here. The Royal Society of Chemistry 2023-11-10 /pmc/articles/PMC10664470/ /pubmed/38023495 http://dx.doi.org/10.1039/d3sc03805j Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Adrion, Daniel M.
Karunaratne, Waruni V.
Lopez, Steven A.
Multiconfigurational photodynamics simulations reveal the mechanism of photodecarbonylations of cyclopropenones in explicit aqueous environments
title Multiconfigurational photodynamics simulations reveal the mechanism of photodecarbonylations of cyclopropenones in explicit aqueous environments
title_full Multiconfigurational photodynamics simulations reveal the mechanism of photodecarbonylations of cyclopropenones in explicit aqueous environments
title_fullStr Multiconfigurational photodynamics simulations reveal the mechanism of photodecarbonylations of cyclopropenones in explicit aqueous environments
title_full_unstemmed Multiconfigurational photodynamics simulations reveal the mechanism of photodecarbonylations of cyclopropenones in explicit aqueous environments
title_short Multiconfigurational photodynamics simulations reveal the mechanism of photodecarbonylations of cyclopropenones in explicit aqueous environments
title_sort multiconfigurational photodynamics simulations reveal the mechanism of photodecarbonylations of cyclopropenones in explicit aqueous environments
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10664470/
https://www.ncbi.nlm.nih.gov/pubmed/38023495
http://dx.doi.org/10.1039/d3sc03805j
work_keys_str_mv AT adriondanielm multiconfigurationalphotodynamicssimulationsrevealthemechanismofphotodecarbonylationsofcyclopropenonesinexplicitaqueousenvironments
AT karunaratnewaruniv multiconfigurationalphotodynamicssimulationsrevealthemechanismofphotodecarbonylationsofcyclopropenonesinexplicitaqueousenvironments
AT lopezstevena multiconfigurationalphotodynamicssimulationsrevealthemechanismofphotodecarbonylationsofcyclopropenonesinexplicitaqueousenvironments