Cargando…

Utilizing Extraepitopic Amino Acid Substitutions to Define Changes in the Accessibility of Conformational Epitopes of the Bacillus cereus HlyII C-Terminal Domain

Hemolysin II (HlyII)—one of the pathogenic factors of Bacillus cereus, a pore-forming β-barrel toxin—possesses a C-terminal extension of 94 amino acid residues, designated as the C-terminal domain of HlyII (HlyIICTD), which plays an important role in the functioning of the toxin. Our previous work d...

Descripción completa

Detalles Bibliográficos
Autores principales: Rudenko, Natalia V., Nagel, Alexey S., Melnik, Bogdan S., Karatovskaya, Anna P., Vetrova, Olesya S., Zamyatina, Anna V., Andreeva-Kovalevskaya, Zhanna I., Siunov, Alexander V., Shlyapnikov, Mikhail G., Brovko, Fedor A., Solonin, Alexander S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10671226/
https://www.ncbi.nlm.nih.gov/pubmed/38003626
http://dx.doi.org/10.3390/ijms242216437
_version_ 1785149390300643328
author Rudenko, Natalia V.
Nagel, Alexey S.
Melnik, Bogdan S.
Karatovskaya, Anna P.
Vetrova, Olesya S.
Zamyatina, Anna V.
Andreeva-Kovalevskaya, Zhanna I.
Siunov, Alexander V.
Shlyapnikov, Mikhail G.
Brovko, Fedor A.
Solonin, Alexander S.
author_facet Rudenko, Natalia V.
Nagel, Alexey S.
Melnik, Bogdan S.
Karatovskaya, Anna P.
Vetrova, Olesya S.
Zamyatina, Anna V.
Andreeva-Kovalevskaya, Zhanna I.
Siunov, Alexander V.
Shlyapnikov, Mikhail G.
Brovko, Fedor A.
Solonin, Alexander S.
author_sort Rudenko, Natalia V.
collection PubMed
description Hemolysin II (HlyII)—one of the pathogenic factors of Bacillus cereus, a pore-forming β-barrel toxin—possesses a C-terminal extension of 94 amino acid residues, designated as the C-terminal domain of HlyII (HlyIICTD), which plays an important role in the functioning of the toxin. Our previous work described a monoclonal antibody (HlyIIC-20), capable of strain-specific inhibition of hemolysis caused by HlyII, and demonstrated the dependence of the efficiency of hemolysis on the presence of proline at position 324 in HlyII outside the conformational antigenic determinant. In this work, we studied 16 mutant forms of HlyIICTD. Each of the mutations, obtained via multiple site-directed mutagenesis leading to the replacement of amino acid residues lying on the surface of the 3D structure of HlyIICTD, led to a decrease in the interaction of HlyIIC-20 with the mutant form of the protein. Changes in epitope structure confirm the high conformational mobility of HlyIICTD required for the functioning of HlyII. Comparison of the effect of the introduced mutations on the effectiveness of interactions between HlyIICTD and HlyIIC-20 and a control antibody recognizing a non-overlapping epitope enabled the identification of the amino acid residues N339 and K340, included in the conformational antigenic determinant recognized by HlyIIC-20.
format Online
Article
Text
id pubmed-10671226
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-106712262023-11-17 Utilizing Extraepitopic Amino Acid Substitutions to Define Changes in the Accessibility of Conformational Epitopes of the Bacillus cereus HlyII C-Terminal Domain Rudenko, Natalia V. Nagel, Alexey S. Melnik, Bogdan S. Karatovskaya, Anna P. Vetrova, Olesya S. Zamyatina, Anna V. Andreeva-Kovalevskaya, Zhanna I. Siunov, Alexander V. Shlyapnikov, Mikhail G. Brovko, Fedor A. Solonin, Alexander S. Int J Mol Sci Article Hemolysin II (HlyII)—one of the pathogenic factors of Bacillus cereus, a pore-forming β-barrel toxin—possesses a C-terminal extension of 94 amino acid residues, designated as the C-terminal domain of HlyII (HlyIICTD), which plays an important role in the functioning of the toxin. Our previous work described a monoclonal antibody (HlyIIC-20), capable of strain-specific inhibition of hemolysis caused by HlyII, and demonstrated the dependence of the efficiency of hemolysis on the presence of proline at position 324 in HlyII outside the conformational antigenic determinant. In this work, we studied 16 mutant forms of HlyIICTD. Each of the mutations, obtained via multiple site-directed mutagenesis leading to the replacement of amino acid residues lying on the surface of the 3D structure of HlyIICTD, led to a decrease in the interaction of HlyIIC-20 with the mutant form of the protein. Changes in epitope structure confirm the high conformational mobility of HlyIICTD required for the functioning of HlyII. Comparison of the effect of the introduced mutations on the effectiveness of interactions between HlyIICTD and HlyIIC-20 and a control antibody recognizing a non-overlapping epitope enabled the identification of the amino acid residues N339 and K340, included in the conformational antigenic determinant recognized by HlyIIC-20. MDPI 2023-11-17 /pmc/articles/PMC10671226/ /pubmed/38003626 http://dx.doi.org/10.3390/ijms242216437 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Rudenko, Natalia V.
Nagel, Alexey S.
Melnik, Bogdan S.
Karatovskaya, Anna P.
Vetrova, Olesya S.
Zamyatina, Anna V.
Andreeva-Kovalevskaya, Zhanna I.
Siunov, Alexander V.
Shlyapnikov, Mikhail G.
Brovko, Fedor A.
Solonin, Alexander S.
Utilizing Extraepitopic Amino Acid Substitutions to Define Changes in the Accessibility of Conformational Epitopes of the Bacillus cereus HlyII C-Terminal Domain
title Utilizing Extraepitopic Amino Acid Substitutions to Define Changes in the Accessibility of Conformational Epitopes of the Bacillus cereus HlyII C-Terminal Domain
title_full Utilizing Extraepitopic Amino Acid Substitutions to Define Changes in the Accessibility of Conformational Epitopes of the Bacillus cereus HlyII C-Terminal Domain
title_fullStr Utilizing Extraepitopic Amino Acid Substitutions to Define Changes in the Accessibility of Conformational Epitopes of the Bacillus cereus HlyII C-Terminal Domain
title_full_unstemmed Utilizing Extraepitopic Amino Acid Substitutions to Define Changes in the Accessibility of Conformational Epitopes of the Bacillus cereus HlyII C-Terminal Domain
title_short Utilizing Extraepitopic Amino Acid Substitutions to Define Changes in the Accessibility of Conformational Epitopes of the Bacillus cereus HlyII C-Terminal Domain
title_sort utilizing extraepitopic amino acid substitutions to define changes in the accessibility of conformational epitopes of the bacillus cereus hlyii c-terminal domain
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10671226/
https://www.ncbi.nlm.nih.gov/pubmed/38003626
http://dx.doi.org/10.3390/ijms242216437
work_keys_str_mv AT rudenkonataliav utilizingextraepitopicaminoacidsubstitutionstodefinechangesintheaccessibilityofconformationalepitopesofthebacilluscereushlyiicterminaldomain
AT nagelalexeys utilizingextraepitopicaminoacidsubstitutionstodefinechangesintheaccessibilityofconformationalepitopesofthebacilluscereushlyiicterminaldomain
AT melnikbogdans utilizingextraepitopicaminoacidsubstitutionstodefinechangesintheaccessibilityofconformationalepitopesofthebacilluscereushlyiicterminaldomain
AT karatovskayaannap utilizingextraepitopicaminoacidsubstitutionstodefinechangesintheaccessibilityofconformationalepitopesofthebacilluscereushlyiicterminaldomain
AT vetrovaolesyas utilizingextraepitopicaminoacidsubstitutionstodefinechangesintheaccessibilityofconformationalepitopesofthebacilluscereushlyiicterminaldomain
AT zamyatinaannav utilizingextraepitopicaminoacidsubstitutionstodefinechangesintheaccessibilityofconformationalepitopesofthebacilluscereushlyiicterminaldomain
AT andreevakovalevskayazhannai utilizingextraepitopicaminoacidsubstitutionstodefinechangesintheaccessibilityofconformationalepitopesofthebacilluscereushlyiicterminaldomain
AT siunovalexanderv utilizingextraepitopicaminoacidsubstitutionstodefinechangesintheaccessibilityofconformationalepitopesofthebacilluscereushlyiicterminaldomain
AT shlyapnikovmikhailg utilizingextraepitopicaminoacidsubstitutionstodefinechangesintheaccessibilityofconformationalepitopesofthebacilluscereushlyiicterminaldomain
AT brovkofedora utilizingextraepitopicaminoacidsubstitutionstodefinechangesintheaccessibilityofconformationalepitopesofthebacilluscereushlyiicterminaldomain
AT soloninalexanders utilizingextraepitopicaminoacidsubstitutionstodefinechangesintheaccessibilityofconformationalepitopesofthebacilluscereushlyiicterminaldomain