Metagenomic binning of PacBio HiFi data prior to assembly reveals a complete genome of Cosmopolites sordidus (Germar) (Coleopterea: Curculionidae, Dryophthorinae) the most damaging arthropod pest of bananas and plantains

PacBio HiFi sequencing was employed in combination with metagenomic binning to produce a high-quality reference genome of Cosmopolites sordidus. We compared k-mer and alignment reference based pre-binning and post-binning approaches to remove contamination. We were also interested to know if the pos...

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Detalles Bibliográficos
Autores principales: Rodriguez Ruiz, Alfredo, Van Dam, Alex R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2023
Materias:
Agricultural Science
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10676084/
https://www.ncbi.nlm.nih.gov/pubmed/38025758
http://dx.doi.org/10.7717/peerj.16276

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10676084/
https://www.ncbi.nlm.nih.gov/pubmed/38025758
http://dx.doi.org/10.7717/peerj.16276

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