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283. Screening the PE/PPE secreted effectors of Mycobacterium tuberculosis to uncover novel virulence-promoting genes

BACKGROUND: Mycobacterium tuberculosis (M.tb) remains the leading cause of infectious disease mortality, with over 10 million active cases and 1.5 million deaths annually at the global scale. Although M.tb infection prompts highly inflammatory granulomatous lesions in the lung, the bacterium is not...

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Autores principales: Koleske, Benjamin, Shen, Jessica, Gupta, Manish, Bishai, William
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10677226/
http://dx.doi.org/10.1093/ofid/ofad500.355
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author Koleske, Benjamin
Shen, Jessica
Gupta, Manish
Bishai, William
author_facet Koleske, Benjamin
Shen, Jessica
Gupta, Manish
Bishai, William
author_sort Koleske, Benjamin
collection PubMed
description BACKGROUND: Mycobacterium tuberculosis (M.tb) remains the leading cause of infectious disease mortality, with over 10 million active cases and 1.5 million deaths annually at the global scale. Although M.tb infection prompts highly inflammatory granulomatous lesions in the lung, the bacterium is not eradicated by the immune cell infiltrate. Instead, M.tb uses numerous virulence factors to facilitate growth within macrophages, including secretory proteins that subvert host immune processes. In this work, we examined the substrates of ESX-5, a prolific type VII secretion system unique to slow-growing pathogenic mycobacteria, for their roles in contributing to bacterial virulence in a mouse lung infection model. These secretory substrates, the PE and PPE family proteins (named for conserved Pro-Glu and Pro-Pro-Glu domains), have evolutionarily expanded from 11 members in the harmless commensal M. smegmatis to 167 members in the M.tb H37Rv reference strain, suggesting they serve critical functions for an intracellular pathogen with an otherwise reduced genome. Certain PE/PPE genes have been implicated in a broad range of immune relevant functions, including TLR signaling, apoptosis inhibition, and NF-κB activation, though the vast majority remain understudied. M.tb secretion during infection [Figure: see text] (A) Following phagocytosis by a macrophage, M.tb blocks phagosome maturation and permeabilizes the phagosome to secrete effectors into the macrophage cytoplasm. (B) The ESX-5 system secretes a large (> 150) repertoire of PE/PPE proteins predicted to alter host signaling pathways. METHODS: We performed Tn-Seq in the TB mouse model using a pooled library of 81 M.tb strains with single transposon insertions in known PE/PPE genes, all of which show no in vitro growth defect, to identify mutants that demonstrate an in vivo fitness cost. RESULTS: Bacterial genomes were harvested from the lungs of aerosol-infected BALB/c mice at acute (1 week) and subacute (3 week) timepoints and compared to the composition of the initial pool (day 1). Deep sequencing demonstrated significant decreases in the prevalence of 20 strains over time; furthermore, the findings were highly reproducible across all animals (n=10 per timepoint), showed time-dependent kinetics, and identified several PE/PPE genes previously found to contribute to M.tb pathogenesis. CONCLUSION: Our mouse Tn-Seq screen of 81 M.tb PE/PPE mutants identified 20 mutants that were attenuated for growth in mice in a pooled competition format. Thus, a high proportion of PE/PPE genes may be virulence-promoting factors. DISCLOSURES: All Authors: No reported disclosures
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spelling pubmed-106772262023-11-27 283. Screening the PE/PPE secreted effectors of Mycobacterium tuberculosis to uncover novel virulence-promoting genes Koleske, Benjamin Shen, Jessica Gupta, Manish Bishai, William Open Forum Infect Dis Abstract BACKGROUND: Mycobacterium tuberculosis (M.tb) remains the leading cause of infectious disease mortality, with over 10 million active cases and 1.5 million deaths annually at the global scale. Although M.tb infection prompts highly inflammatory granulomatous lesions in the lung, the bacterium is not eradicated by the immune cell infiltrate. Instead, M.tb uses numerous virulence factors to facilitate growth within macrophages, including secretory proteins that subvert host immune processes. In this work, we examined the substrates of ESX-5, a prolific type VII secretion system unique to slow-growing pathogenic mycobacteria, for their roles in contributing to bacterial virulence in a mouse lung infection model. These secretory substrates, the PE and PPE family proteins (named for conserved Pro-Glu and Pro-Pro-Glu domains), have evolutionarily expanded from 11 members in the harmless commensal M. smegmatis to 167 members in the M.tb H37Rv reference strain, suggesting they serve critical functions for an intracellular pathogen with an otherwise reduced genome. Certain PE/PPE genes have been implicated in a broad range of immune relevant functions, including TLR signaling, apoptosis inhibition, and NF-κB activation, though the vast majority remain understudied. M.tb secretion during infection [Figure: see text] (A) Following phagocytosis by a macrophage, M.tb blocks phagosome maturation and permeabilizes the phagosome to secrete effectors into the macrophage cytoplasm. (B) The ESX-5 system secretes a large (> 150) repertoire of PE/PPE proteins predicted to alter host signaling pathways. METHODS: We performed Tn-Seq in the TB mouse model using a pooled library of 81 M.tb strains with single transposon insertions in known PE/PPE genes, all of which show no in vitro growth defect, to identify mutants that demonstrate an in vivo fitness cost. RESULTS: Bacterial genomes were harvested from the lungs of aerosol-infected BALB/c mice at acute (1 week) and subacute (3 week) timepoints and compared to the composition of the initial pool (day 1). Deep sequencing demonstrated significant decreases in the prevalence of 20 strains over time; furthermore, the findings were highly reproducible across all animals (n=10 per timepoint), showed time-dependent kinetics, and identified several PE/PPE genes previously found to contribute to M.tb pathogenesis. CONCLUSION: Our mouse Tn-Seq screen of 81 M.tb PE/PPE mutants identified 20 mutants that were attenuated for growth in mice in a pooled competition format. Thus, a high proportion of PE/PPE genes may be virulence-promoting factors. DISCLOSURES: All Authors: No reported disclosures Oxford University Press 2023-11-27 /pmc/articles/PMC10677226/ http://dx.doi.org/10.1093/ofid/ofad500.355 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Abstract
Koleske, Benjamin
Shen, Jessica
Gupta, Manish
Bishai, William
283. Screening the PE/PPE secreted effectors of Mycobacterium tuberculosis to uncover novel virulence-promoting genes
title 283. Screening the PE/PPE secreted effectors of Mycobacterium tuberculosis to uncover novel virulence-promoting genes
title_full 283. Screening the PE/PPE secreted effectors of Mycobacterium tuberculosis to uncover novel virulence-promoting genes
title_fullStr 283. Screening the PE/PPE secreted effectors of Mycobacterium tuberculosis to uncover novel virulence-promoting genes
title_full_unstemmed 283. Screening the PE/PPE secreted effectors of Mycobacterium tuberculosis to uncover novel virulence-promoting genes
title_short 283. Screening the PE/PPE secreted effectors of Mycobacterium tuberculosis to uncover novel virulence-promoting genes
title_sort 283. screening the pe/ppe secreted effectors of mycobacterium tuberculosis to uncover novel virulence-promoting genes
topic Abstract
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10677226/
http://dx.doi.org/10.1093/ofid/ofad500.355
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