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RabbitKSSD: accelerating genome distance estimation on modern multi-core architectures

SUMMARY: We propose RabbitKSSD, a high-speed genome distance estimation tool. Specifically, we leverage load-balanced task partitioning, fast I/O, efficient intermediate result accesses, and high-performance data structures to improve overall efficiency. Our performance evaluation demonstrates that...

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Detalles Bibliográficos
Autores principales:	Xu, Xiaoming, Yin, Zekun, Yan, Lifeng, Yi, Huiguang, Wang, Hua, Schmidt, Bertil, Liu, Weiguo
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2023
Materias:	Applications Note
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10681859/ https://www.ncbi.nlm.nih.gov/pubmed/37971961 http://dx.doi.org/10.1093/bioinformatics/btad695

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