kakapo: easy extraction and annotation of genes from raw RNA-seq reads

kakapo (kākāpō) is a Python-based pipeline that allows users to extract and assemble one or more specified genes or gene families. It flexibly uses original RNA-seq read or GenBank SRA accession inputs without performing global assembly of entire transcriptomes or metatranscriptomes. The pipeline id...

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Detalles Bibliográficos
Autores principales: Ramanauskas, Karolis, Igić, Boris
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2023
Materias:
Bioinformatics
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10688300/
https://www.ncbi.nlm.nih.gov/pubmed/38034874
http://dx.doi.org/10.7717/peerj.16456

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10688300/
https://www.ncbi.nlm.nih.gov/pubmed/38034874
http://dx.doi.org/10.7717/peerj.16456

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