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Structural basis of a redox-dependent conformational switch that regulates the stress kinase p38α

Many functional aspects of the protein kinase p38α have been illustrated by more than three hundred structures determined in the presence of reducing agents. These structures correspond to free forms and complexes with activators, substrates, and inhibitors. Here we report the conformation of an oxi...

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Autores principales: Pous, Joan, Baginski, Blazej, Martin-Malpartida, Pau, González, Lorena, Scarpa, Margherita, Aragon, Eric, Ruiz, Lidia, Mees, Rebeca A., Iglesias-Fernández, Javier, Orozco, Modesto, Nebreda, Angel R., Macias, Maria J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10692146/
https://www.ncbi.nlm.nih.gov/pubmed/38040726
http://dx.doi.org/10.1038/s41467-023-43763-5
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author Pous, Joan
Baginski, Blazej
Martin-Malpartida, Pau
González, Lorena
Scarpa, Margherita
Aragon, Eric
Ruiz, Lidia
Mees, Rebeca A.
Iglesias-Fernández, Javier
Orozco, Modesto
Nebreda, Angel R.
Macias, Maria J.
author_facet Pous, Joan
Baginski, Blazej
Martin-Malpartida, Pau
González, Lorena
Scarpa, Margherita
Aragon, Eric
Ruiz, Lidia
Mees, Rebeca A.
Iglesias-Fernández, Javier
Orozco, Modesto
Nebreda, Angel R.
Macias, Maria J.
author_sort Pous, Joan
collection PubMed
description Many functional aspects of the protein kinase p38α have been illustrated by more than three hundred structures determined in the presence of reducing agents. These structures correspond to free forms and complexes with activators, substrates, and inhibitors. Here we report the conformation of an oxidized state with an intramolecular disulfide bond between Cys119 and Cys162 that is conserved in vertebrates. The structure of the oxidized state does not affect the conformation of the catalytic site, but alters the docking groove by partially unwinding and displacing the short αD helix due to the movement of Cys119 towards Cys162. The transition between oxidized and reduced conformations provides a mechanism for fine-tuning p38α activity as a function of redox conditions, beyond its activation loop phosphorylation. Moreover, the conformational equilibrium between these redox forms reveals an unexplored cleft for p38α inhibitor design that we describe in detail.
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spelling pubmed-106921462023-12-03 Structural basis of a redox-dependent conformational switch that regulates the stress kinase p38α Pous, Joan Baginski, Blazej Martin-Malpartida, Pau González, Lorena Scarpa, Margherita Aragon, Eric Ruiz, Lidia Mees, Rebeca A. Iglesias-Fernández, Javier Orozco, Modesto Nebreda, Angel R. Macias, Maria J. Nat Commun Article Many functional aspects of the protein kinase p38α have been illustrated by more than three hundred structures determined in the presence of reducing agents. These structures correspond to free forms and complexes with activators, substrates, and inhibitors. Here we report the conformation of an oxidized state with an intramolecular disulfide bond between Cys119 and Cys162 that is conserved in vertebrates. The structure of the oxidized state does not affect the conformation of the catalytic site, but alters the docking groove by partially unwinding and displacing the short αD helix due to the movement of Cys119 towards Cys162. The transition between oxidized and reduced conformations provides a mechanism for fine-tuning p38α activity as a function of redox conditions, beyond its activation loop phosphorylation. Moreover, the conformational equilibrium between these redox forms reveals an unexplored cleft for p38α inhibitor design that we describe in detail. Nature Publishing Group UK 2023-12-01 /pmc/articles/PMC10692146/ /pubmed/38040726 http://dx.doi.org/10.1038/s41467-023-43763-5 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Pous, Joan
Baginski, Blazej
Martin-Malpartida, Pau
González, Lorena
Scarpa, Margherita
Aragon, Eric
Ruiz, Lidia
Mees, Rebeca A.
Iglesias-Fernández, Javier
Orozco, Modesto
Nebreda, Angel R.
Macias, Maria J.
Structural basis of a redox-dependent conformational switch that regulates the stress kinase p38α
title Structural basis of a redox-dependent conformational switch that regulates the stress kinase p38α
title_full Structural basis of a redox-dependent conformational switch that regulates the stress kinase p38α
title_fullStr Structural basis of a redox-dependent conformational switch that regulates the stress kinase p38α
title_full_unstemmed Structural basis of a redox-dependent conformational switch that regulates the stress kinase p38α
title_short Structural basis of a redox-dependent conformational switch that regulates the stress kinase p38α
title_sort structural basis of a redox-dependent conformational switch that regulates the stress kinase p38α
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10692146/
https://www.ncbi.nlm.nih.gov/pubmed/38040726
http://dx.doi.org/10.1038/s41467-023-43763-5
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