A restraint molecular dynamics and simulated annealing approach for protein homology modeling utilizing mean angles

BACKGROUND: We have developed the program PERMOL for semi-automated homology modeling of proteins. It is based on restrained molecular dynamics using a simulated annealing protocol in torsion angle space. As main restraints defining the optimal local geometry of the structure weighted mean dihedral...

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Detalles Bibliográficos
Autores principales: Möglich, Andreas, Weinfurtner, Daniel, Maurer, Till, Gronwald, Wolfram, Kalbitzer, Hans Robert
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2005
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1127110/
https://www.ncbi.nlm.nih.gov/pubmed/15819976
http://dx.doi.org/10.1186/1471-2105-6-91

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1127110/
https://www.ncbi.nlm.nih.gov/pubmed/15819976
http://dx.doi.org/10.1186/1471-2105-6-91

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