Cargando…
ASPIC: a novel method to predict the exon-intron structure of a gene that is optimally compatible to a set of transcript sequences
BACKGROUND: Currently available methods to predict splice sites are mainly based on the independent and progressive alignment of transcript data (mostly ESTs) to the genomic sequence. Apart from often being computationally expensive, this approach is vulnerable to several problems – hence the need t...
Autores principales: | Bonizzoni, Paola, Rizzi, Raffaella, Pesole, Graziano |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2005
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1276783/ https://www.ncbi.nlm.nih.gov/pubmed/16207377 http://dx.doi.org/10.1186/1471-2105-6-244 |
Ejemplares similares
-
ASPIC: a web resource for alternative splicing prediction and transcript isoforms characterization
por: Castrignanò, Tiziana, et al.
Publicado: (2006) -
ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing
por: Martelli, Pier L., et al.
Publicado: (2011) -
ASPic-GeneID: A Lightweight Pipeline for Gene Prediction and Alternative Isoforms Detection
por: Alioto, Tyler, et al.
Publicado: (2013) -
IntEREst: intron-exon retention estimator
por: Oghabian, Ali, et al.
Publicado: (2018) -
ASPIC2
por: Potzger, K
Publicado: (2010)