Choosing the best heuristic for seeded alignment of DNA sequences

BACKGROUND: Seeded alignment is an important component of algorithms for fast, large-scale DNA similarity search. A good seed matching heuristic can reduce the execution time of genomic-scale sequence comparison without degrading sensitivity. Recently, many types of seed have been proposed to improv...

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Detalles Bibliográficos
Autores principales: Sun, Yanni, Buhler, Jeremy
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2006
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1468433/
https://www.ncbi.nlm.nih.gov/pubmed/16533404
http://dx.doi.org/10.1186/1471-2105-7-133

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1468433/
https://www.ncbi.nlm.nih.gov/pubmed/16533404
http://dx.doi.org/10.1186/1471-2105-7-133

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