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The use of a physiologically based pharmacokinetic model to evaluate deconvolution measurements of systemic absorption
BACKGROUND: An unknown input function can be determined by deconvolution using the systemic bolus input function (r) determined using an experimental input of duration ranging from a few seconds to many minutes. The quantitative relation between the duration of the input and the accuracy of r is unk...
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2003
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC153531/ https://www.ncbi.nlm.nih.gov/pubmed/12659643 http://dx.doi.org/10.1186/1472-6904-3-1 |
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author | Levitt, David G |
author_facet | Levitt, David G |
author_sort | Levitt, David G |
collection | PubMed |
description | BACKGROUND: An unknown input function can be determined by deconvolution using the systemic bolus input function (r) determined using an experimental input of duration ranging from a few seconds to many minutes. The quantitative relation between the duration of the input and the accuracy of r is unknown. Although a large number of deconvolution procedures have been described, these routines are not available in a convenient software package. METHODS: Four deconvolution methods are implemented in a new, user-friendly software program (PKQuest, ). Three of these methods are characterized by input parameters that are adjusted by the user to provide the "best" fit. A new approach is used to determine these parameters, based on the assumption that the input can be approximated by a gamma distribution. Deconvolution methodologies are evaluated using data generated from a physiologically based pharmacokinetic model (PBPK). RESULTS AND CONCLUSIONS: The 11-compartment PBPK model is accurately described by either a 2 or 3-exponential function, depending on whether or not there is significant tissue binding. For an accurate estimate of r the first venous sample should be at or before the end of the constant infusion and a long (10 minute) constant infusion is preferable to a bolus injection. For noisy data, a gamma distribution deconvolution provides the best result if the input has the form of a gamma distribution. For other input functions, good results are obtained using deconvolution methods based on modeling the input with either a B-spline or uniform dense set of time points. |
format | Text |
id | pubmed-153531 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2003 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-1535312003-04-19 The use of a physiologically based pharmacokinetic model to evaluate deconvolution measurements of systemic absorption Levitt, David G BMC Clin Pharmacol Research Article BACKGROUND: An unknown input function can be determined by deconvolution using the systemic bolus input function (r) determined using an experimental input of duration ranging from a few seconds to many minutes. The quantitative relation between the duration of the input and the accuracy of r is unknown. Although a large number of deconvolution procedures have been described, these routines are not available in a convenient software package. METHODS: Four deconvolution methods are implemented in a new, user-friendly software program (PKQuest, ). Three of these methods are characterized by input parameters that are adjusted by the user to provide the "best" fit. A new approach is used to determine these parameters, based on the assumption that the input can be approximated by a gamma distribution. Deconvolution methodologies are evaluated using data generated from a physiologically based pharmacokinetic model (PBPK). RESULTS AND CONCLUSIONS: The 11-compartment PBPK model is accurately described by either a 2 or 3-exponential function, depending on whether or not there is significant tissue binding. For an accurate estimate of r the first venous sample should be at or before the end of the constant infusion and a long (10 minute) constant infusion is preferable to a bolus injection. For noisy data, a gamma distribution deconvolution provides the best result if the input has the form of a gamma distribution. For other input functions, good results are obtained using deconvolution methods based on modeling the input with either a B-spline or uniform dense set of time points. BioMed Central 2003-03-19 /pmc/articles/PMC153531/ /pubmed/12659643 http://dx.doi.org/10.1186/1472-6904-3-1 Text en Copyright © 2003 Levitt; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original URL. |
spellingShingle | Research Article Levitt, David G The use of a physiologically based pharmacokinetic model to evaluate deconvolution measurements of systemic absorption |
title | The use of a physiologically based pharmacokinetic model to evaluate deconvolution measurements of systemic absorption |
title_full | The use of a physiologically based pharmacokinetic model to evaluate deconvolution measurements of systemic absorption |
title_fullStr | The use of a physiologically based pharmacokinetic model to evaluate deconvolution measurements of systemic absorption |
title_full_unstemmed | The use of a physiologically based pharmacokinetic model to evaluate deconvolution measurements of systemic absorption |
title_short | The use of a physiologically based pharmacokinetic model to evaluate deconvolution measurements of systemic absorption |
title_sort | use of a physiologically based pharmacokinetic model to evaluate deconvolution measurements of systemic absorption |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC153531/ https://www.ncbi.nlm.nih.gov/pubmed/12659643 http://dx.doi.org/10.1186/1472-6904-3-1 |
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