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HHrep: de novo protein repeat detection and the origin of TIM barrels

HHrep is a web server for the de novo identification of repeats in protein sequences, which is based on the pairwise comparison of profile hidden Markov models (HMMs). Its main strength is its sensitivity, allowing it to detect highly divergent repeat units in protein sequences whose repeats could a...

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Detalles Bibliográficos
Autores principales: Söding, Johannes, Remmert, Michael, Biegert, Andreas
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2006
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1538828/
https://www.ncbi.nlm.nih.gov/pubmed/16844977
http://dx.doi.org/10.1093/nar/gkl130