PROTOGENE: turning amino acid alignments into bona fide CDS nucleotide alignments

We describe Protogene, a server that can turn a protein multiple sequence alignment into the equivalent alignment of the original gene coding DNA. Protogene relies on a pipeline where every initial protein sequence is BLASTed against RefSeq or NR. The annotation associated with potential matches is...

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Detalles Bibliográficos
Autores principales: Moretti, Sébastien, Reinier, Frédéric, Poirot, Olivier, Armougom, Fabrice, Audic, Stéphane, Keduas, Vladimir, Notredame, Cédric
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2006
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1538918/
https://www.ncbi.nlm.nih.gov/pubmed/16845080
http://dx.doi.org/10.1093/nar/gkl170

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1538918/
https://www.ncbi.nlm.nih.gov/pubmed/16845080
http://dx.doi.org/10.1093/nar/gkl170

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