Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)

Aphids are the leading pests in agricultural crops. A large-scale sequencing of 40,904 ESTs from the pea aphid Acyrthosiphon pisum was carried out to define a catalog of 12,082 unique transcripts. A strong AT bias was found, indicating a compositional shift between Drosophila melanogaster and A. pis...

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Autores principales: Sabater-Muñoz, Beatriz, Legeai, Fabrice, Rispe, Claude, Bonhomme, Joël, Dearden, Peter, Dossat, Carole, Duclert, Aymeric, Gauthier, Jean-Pierre, Ducray, Danièle Giblot, Hunter, Wayne, Dang, Phat, Kambhampati, Srini, Martinez-Torres, David, Cortes, Teresa, Moya, Andrès, Nakabachi, Atsushi, Philippe, Cathy, Prunier-Leterme, Nathalie, Rahbé, Yvan, Simon, Jean-Christophe, Stern, David L, Wincker, Patrick, Tagu, Denis
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2006
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1557754/
https://www.ncbi.nlm.nih.gov/pubmed/16542494
http://dx.doi.org/10.1186/gb-2006-7-3-r21
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author Sabater-Muñoz, Beatriz
Legeai, Fabrice
Rispe, Claude
Bonhomme, Joël
Dearden, Peter
Dossat, Carole
Duclert, Aymeric
Gauthier, Jean-Pierre
Ducray, Danièle Giblot
Hunter, Wayne
Dang, Phat
Kambhampati, Srini
Martinez-Torres, David
Cortes, Teresa
Moya, Andrès
Nakabachi, Atsushi
Philippe, Cathy
Prunier-Leterme, Nathalie
Rahbé, Yvan
Simon, Jean-Christophe
Stern, David L
Wincker, Patrick
Tagu, Denis
author_facet Sabater-Muñoz, Beatriz
Legeai, Fabrice
Rispe, Claude
Bonhomme, Joël
Dearden, Peter
Dossat, Carole
Duclert, Aymeric
Gauthier, Jean-Pierre
Ducray, Danièle Giblot
Hunter, Wayne
Dang, Phat
Kambhampati, Srini
Martinez-Torres, David
Cortes, Teresa
Moya, Andrès
Nakabachi, Atsushi
Philippe, Cathy
Prunier-Leterme, Nathalie
Rahbé, Yvan
Simon, Jean-Christophe
Stern, David L
Wincker, Patrick
Tagu, Denis
author_sort Sabater-Muñoz, Beatriz
collection PubMed
description Aphids are the leading pests in agricultural crops. A large-scale sequencing of 40,904 ESTs from the pea aphid Acyrthosiphon pisum was carried out to define a catalog of 12,082 unique transcripts. A strong AT bias was found, indicating a compositional shift between Drosophila melanogaster and A. pisum. An in silico profiling analysis characterized 135 transcripts specific to pea-aphid tissues (relating to bacteriocytes and parthenogenetic embryos). This project is the first to address the genetics of the Hemiptera and of a hemimetabolous insect.
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spelling pubmed-15577542006-09-01 Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera) Sabater-Muñoz, Beatriz Legeai, Fabrice Rispe, Claude Bonhomme, Joël Dearden, Peter Dossat, Carole Duclert, Aymeric Gauthier, Jean-Pierre Ducray, Danièle Giblot Hunter, Wayne Dang, Phat Kambhampati, Srini Martinez-Torres, David Cortes, Teresa Moya, Andrès Nakabachi, Atsushi Philippe, Cathy Prunier-Leterme, Nathalie Rahbé, Yvan Simon, Jean-Christophe Stern, David L Wincker, Patrick Tagu, Denis Genome Biol Method Aphids are the leading pests in agricultural crops. A large-scale sequencing of 40,904 ESTs from the pea aphid Acyrthosiphon pisum was carried out to define a catalog of 12,082 unique transcripts. A strong AT bias was found, indicating a compositional shift between Drosophila melanogaster and A. pisum. An in silico profiling analysis characterized 135 transcripts specific to pea-aphid tissues (relating to bacteriocytes and parthenogenetic embryos). This project is the first to address the genetics of the Hemiptera and of a hemimetabolous insect. BioMed Central 2006 2006-03-10 /pmc/articles/PMC1557754/ /pubmed/16542494 http://dx.doi.org/10.1186/gb-2006-7-3-r21 Text en Copyright © 2006 Sabater-Muñoz et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Method
Sabater-Muñoz, Beatriz
Legeai, Fabrice
Rispe, Claude
Bonhomme, Joël
Dearden, Peter
Dossat, Carole
Duclert, Aymeric
Gauthier, Jean-Pierre
Ducray, Danièle Giblot
Hunter, Wayne
Dang, Phat
Kambhampati, Srini
Martinez-Torres, David
Cortes, Teresa
Moya, Andrès
Nakabachi, Atsushi
Philippe, Cathy
Prunier-Leterme, Nathalie
Rahbé, Yvan
Simon, Jean-Christophe
Stern, David L
Wincker, Patrick
Tagu, Denis
Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)
title Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)
title_full Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)
title_fullStr Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)
title_full_unstemmed Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)
title_short Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)
title_sort large-scale gene discovery in the pea aphid acyrthosiphon pisum (hemiptera)
topic Method
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1557754/
https://www.ncbi.nlm.nih.gov/pubmed/16542494
http://dx.doi.org/10.1186/gb-2006-7-3-r21
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