Scanning sequences after Gibbs sampling to find multiple occurrences of functional elements

BACKGROUND: Many DNA regulatory elements occur as multiple instances within a target promoter. Gibbs sampling programs for finding DNA regulatory elements de novo can be prohibitively slow in locating all instances of such an element in a sequence set. RESULTS: We describe an improvement to the A-GL...

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Detalles Bibliográficos
Autores principales: Tharakaraman, Kannan, Mariño-Ramírez, Leonardo, Sheetlin, Sergey L, Landsman, David, Spouge, John L
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2006
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1599759/
https://www.ncbi.nlm.nih.gov/pubmed/16961919
http://dx.doi.org/10.1186/1471-2105-7-408

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1599759/
https://www.ncbi.nlm.nih.gov/pubmed/16961919
http://dx.doi.org/10.1186/1471-2105-7-408

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