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Composition-based statistics and translated nucleotide searches: Improving the TBLASTN module of BLAST
BACKGROUND: TBLASTN is a mode of operation for BLAST that aligns protein sequences to a nucleotide database translated in all six frames. We present the first description of the modern implementation of TBLASTN, focusing on new techniques that were used to implement composition-based statistics for...
Autores principales: | Gertz, E Michael, Yu, Yi-Kuo, Agarwala, Richa, Schäffer, Alejandro A, Altschul, Stephen F |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2006
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1779365/ https://www.ncbi.nlm.nih.gov/pubmed/17156431 http://dx.doi.org/10.1186/1741-7007-4-41 |
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