Cargando…

The gateway pDEST17 expression vector encodes a −1 ribosomal frameshifting sequence

The attB1 site in the Gateway (Invitrogen) bacterial expression vector pDEST17, necessary for in vitro site-specific recombination, contains the sequence AAA-AAA. The sequence A-AAA-AAG within the Escherichia coli dnaX gene is recognized as ‘slippery’ and promotes −1 translational frameshifting. We...

Descripción completa

Detalles Bibliográficos
Autores principales:	Belfield, Eric J., Hughes, Richard K., Tsesmetzis, Nicolas, Naldrett, Mike J., Casey, Rod
Formato:	Texto
Lenguaje:	English
Publicado:	Oxford University Press 2007
Materias:	RNA
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1851650/ https://www.ncbi.nlm.nih.gov/pubmed/17272299 http://dx.doi.org/10.1093/nar/gkm003

Ejemplares similares

Antisense-induced ribosomal frameshifting
por: Henderson, Clark M., et al.
Publicado: (2006)

Stimulation of ribosomal frameshifting by antisense LNA
por: Yu, Chien-Hung, et al.
Publicado: (2010)

Interaction of the HIV-1 frameshift signal with the ribosome
por: Mazauric, Marie-Hélène, et al.
Publicado: (2009)

Stimulation of ribosomal frameshifting by RNA G-quadruplex structures
por: Yu, Chien-Hung, et al.
Publicado: (2014)

The many paths to frameshifting: kinetic modelling and analysis of the effects of different elongation steps on programmed –1 ribosomal frameshifting
por: Liao, Pei-Yu, et al.
Publicado: (2011)

RNA dimerization plays a role in ribosomal frameshifting of the SARS coronavirus
por: Ishimaru, Daniella, et al.
Publicado: (2013)

FSscan: a mechanism-based program to identify +1 ribosomal frameshift hotspots
por: Liao, Pei-Yu, et al.
Publicado: (2009)

EF-G catalyzed translocation dynamics in the presence of ribosomal frameshifting stimulatory signals
por: Kim, Hee-Kyung, et al.
Publicado: (2017)

The three transfer RNAs occupying the A, P and E sites on the ribosome are involved in viral programmed -1 ribosomal frameshift
por: Léger, Mélissa, et al.
Publicado: (2007)

Stem–loop structures can effectively substitute for an RNA pseudoknot in −1 ribosomal frameshifting
por: Yu, Chien-Hung, et al.
Publicado: (2011)

Spacer-length dependence of programmed −1 or −2 ribosomal frameshifting on a U(6)A heptamer supports a role for messenger RNA (mRNA) tension in frameshifting
por: Lin, Zhaoru, et al.
Publicado: (2012)

An intermolecular RNA triplex provides insight into structural determinants for the pseudoknot stimulator of −1 ribosomal frameshifting
por: Chou, Ming-Yuan, et al.
Publicado: (2010)

Multiple Cis-acting elements modulate programmed -1 ribosomal frameshifting in Pea enation mosaic virus
por: Gao, Feng, et al.
Publicado: (2016)

A new kinetic model reveals the synergistic effect of E-, P- and A-sites on +1 ribosomal frameshifting
por: Liao, Pei-Yu, et al.
Publicado: (2008)

Characterization of the stimulators of protein-directed ribosomal frameshifting in Theiler's murine encephalomyelitis virus
por: Napthine, Sawsan, et al.
Publicado: (2019)

Investigating molecular mechanisms of 2A-stimulated ribosomal pausing and frameshifting in Theilovirus
por: Hill, Chris H, et al.
Publicado: (2021)

Endogenous ribosomal frameshift signals operate as mRNA destabilizing elements through at least two molecular pathways in yeast
por: Belew, Ashton T., et al.
Publicado: (2011)

HIV-1 frameshift efficiency is primarily determined by the stability of base pairs positioned at the mRNA entrance channel of the ribosome
por: Mouzakis, Kathryn D., et al.
Publicado: (2013)

-1 Programmed ribosomal frameshifting in Class 2 umbravirus-like RNAs uses multiple long-distance interactions to shift between active and inactive structures and destabilize the frameshift stimulating element
por: Mikkelsen, Anna A, et al.
Publicado: (2023)

The presence of the TAR RNA structure alters the programmed -1 ribosomal frameshift efficiency of the human immunodeficiency virus type 1 (HIV-1) by modifying the rate of translation initiation
por: Gendron, Karine, et al.
Publicado: (2008)

Functional analysis of the SRV-1 RNA frameshifting pseudoknot
por: Olsthoorn, René C. L., et al.
Publicado: (2010)

The role of wobble uridine modifications in +1 translational frameshifting in eukaryotes
por: Tükenmez, Hasan, et al.
Publicado: (2015)

Ensemble simulations: folding, unfolding and misfolding of a high-efficiency frameshifting RNA pseudoknot
por: Q. Nguyen, Khai K., et al.
Publicado: (2017)

Promiscuous behaviour of archaeal ribosomal proteins: Implications for eukaryotic ribosome evolution
por: Armache, Jean-Paul, et al.
Publicado: (2013)

Coordination among tertiary base pairs results in an efficient frameshift-stimulating RNA pseudoknot
por: Chen, Yu-Ting, et al.
Publicado: (2017)

Functional analysis of Saccharomyces cerevisiae ribosomal protein Rpl3p in ribosome synthesis
por: Rosado, Iván V., et al.
Publicado: (2007)

Analysis of ribosome biogenesis factor-modules in yeast cells depleted from pre-ribosomes
por: Merl, Juliane, et al.
Publicado: (2010)

Introns regulate the production of ribosomal proteins by modulating splicing of duplicated ribosomal protein genes
por: Petibon, Cyrielle, et al.
Publicado: (2016)

Crucial elements that maintain the interactions between the regulatory TnaC peptide and the ribosome exit tunnel responsible for Trp inhibition of ribosome function
por: Martínez, Allyson K., et al.
Publicado: (2012)

Molecular paleontology: a biochemical model of the ancestral ribosome
por: Hsiao, Chiaolong, et al.
Publicado: (2013)

Features of 80S mammalian ribosome and its subunits
por: Budkevich, Tatyana V., et al.
Publicado: (2008)

Major centers of motion in the large ribosomal RNAs
por: Paci, Maxim, et al.
Publicado: (2015)

Eukaryotic ribosomal protein RPS25 interacts with the conserved loop region in a dicistroviral intergenic internal ribosome entry site
por: Nishiyama, Takashi, et al.
Publicado: (2007)

Twice exploration of tRNA +1 frameshifting in an elongation cycle of protein synthesis
por: Gamper, Howard, et al.
Publicado: (2021)

Yeast ribosomal protein L7 and its homologue Rlp7 are simultaneously present at distinct sites on pre-60S ribosomal particles
por: Babiano, Reyes, et al.
Publicado: (2013)

Arabidopsis thaliana XRN2 is required for primary cleavage in the pre-ribosomal RNA
por: Zakrzewska-Placzek, Monika, et al.
Publicado: (2010)

Rare ribosomal RNA sequences from archaea stabilize the bacterial ribosome
por: Nissley, Amos J, et al.
Publicado: (2023)

Specificity of the ribosomal A site for aminoacyl-tRNAs
por: Dale, Taraka, et al.
Publicado: (2009)

Contribution of intersubunit bridges to the energy barrier of ribosomal translocation
por: Liu, Qi, et al.
Publicado: (2013)

Yeast polypeptide exit tunnel ribosomal proteins L17, L35 and L37 are necessary to recruit late-assembling factors required for 27SB pre-rRNA processing
por: Gamalinda, Michael, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_i3vqgcufkqohb1k53d9jdfc2e4