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pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows

RNA pseudoknots are an important structural feature of RNAs, but often neglected in computer predictions for reasons of efficiency. Here, we present the pknotsRG Web Server for single sequence RNA secondary structure prediction including pseudoknots. pknotsRG employs the newest Turner energy rules f...

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Detalles Bibliográficos
Autores principales: Reeder, Jens, Steffen, Peter, Giegerich, Robert
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1933184/
https://www.ncbi.nlm.nih.gov/pubmed/17478505
http://dx.doi.org/10.1093/nar/gkm258